Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 AF106564.1-201ENST00000607058 2553 ntBASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 ECEL1P3-201ENST00000427961 737 ntBASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 LINC01023-201ENST00000606054 436 ntBASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF28Q8N1W1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 AC121338.2-201ENST00000622535 1744 ntBASIC28.16■■■□□ 2.1
ARHGEF28Q8N1W1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 NUDT16P1-203ENST00000513809 620 ntBASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 NBPF21P-201ENST00000425093 1451 ntBASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC28.15■■■□□ 2.1
ARHGEF28Q8N1W1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 AC087499.1-201ENST00000418141 1075 ntBASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 TSPY15P-201ENST00000457163 923 ntBASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC28.14■■■□□ 2.1
ARHGEF28Q8N1W1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC28.14■■■□□ 2.09
ARHGEF28Q8N1W1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.09
ARHGEF28Q8N1W1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 AL353708.3-201ENST00000610272 989 ntBASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 PLK5-205ENST00000642079 1969 ntBASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF28Q8N1W1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 AL353807.1-201ENST00000427475 662 ntBASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 PNN-205ENST00000556530 601 ntTSL 2 BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 AF186192.3-201ENST00000583427 947 ntBASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
ARHGEF28Q8N1W1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 AC012306.2-201ENST00000609350 630 ntBASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC28.11■■■□□ 2.09
ARHGEF28Q8N1W1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ARHGEF28Q8N1W1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
ARHGEF28Q8N1W1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
ARHGEF28Q8N1W1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ARHGEF28Q8N1W1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms