Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 SNORA78-201ENST00000459373 127 ntBASIC20.56■□□□□ 0.88
CHPFQ8IZ52 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 AC124016.1-201ENST00000609552 612 ntBASIC20.56■□□□□ 0.88
CHPFQ8IZ52 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHPFQ8IZ52 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHPFQ8IZ52 AC026310.3-201ENST00000625186 2373 ntBASIC20.54■□□□□ 0.88
CHPFQ8IZ52 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 AC027702.1-201ENST00000563810 1770 ntBASIC20.54■□□□□ 0.88
CHPFQ8IZ52 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPFQ8IZ52 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 KRASP1-201ENST00000407852 552 ntBASIC20.53■□□□□ 0.88
CHPFQ8IZ52 AC133681.1-201ENST00000465482 601 ntBASIC20.53■□□□□ 0.88
CHPFQ8IZ52 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPFQ8IZ52 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.52■□□□□ 0.88
CHPFQ8IZ52 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms