Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX60Q8IY21 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX60Q8IY21 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.1■■□□□ 1.61
DDX60Q8IY21 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX60Q8IY21 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX60Q8IY21 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
DDX60Q8IY21 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX60Q8IY21 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
DDX60Q8IY21 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX60Q8IY21 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX60Q8IY21 AL135905.2-201ENST00000584934 1404 ntBASIC25.08■■□□□ 1.61
DDX60Q8IY21 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX60Q8IY21 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.08■■□□□ 1.61
DDX60Q8IY21 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX60Q8IY21 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.08■■□□□ 1.61
DDX60Q8IY21 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX60Q8IY21 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
DDX60Q8IY21 TSPY15P-201ENST00000457163 923 ntBASIC25.08■■□□□ 1.61
DDX60Q8IY21 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.08■■□□□ 1.61
DDX60Q8IY21 MIR4785-201ENST00000585005 73 ntBASIC25.08■■□□□ 1.61
DDX60Q8IY21 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX60Q8IY21 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
DDX60Q8IY21 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX60Q8IY21 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX60Q8IY21 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX60Q8IY21 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.07■■□□□ 1.6
DDX60Q8IY21 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX60Q8IY21 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
DDX60Q8IY21 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX60Q8IY21 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX60Q8IY21 KRT16P5-201ENST00000455284 522 ntBASIC25.06■■□□□ 1.6
DDX60Q8IY21 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX60Q8IY21 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.06■■□□□ 1.6
DDX60Q8IY21 NUDT16P1-203ENST00000513809 620 ntBASIC25.06■■□□□ 1.6
DDX60Q8IY21 PRKY-204ENST00000533551 1019 ntBASIC25.06■■□□□ 1.6
DDX60Q8IY21 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DDX60Q8IY21 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX60Q8IY21 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX60Q8IY21 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX60Q8IY21 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
DDX60Q8IY21 AC087499.1-201ENST00000418141 1075 ntBASIC25.06■■□□□ 1.6
DDX60Q8IY21 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX60Q8IY21 AL121603.2-201ENST00000557373 2117 ntBASIC25.06■■□□□ 1.6
DDX60Q8IY21 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
DDX60Q8IY21 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
DDX60Q8IY21 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX60Q8IY21 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX60Q8IY21 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.05■■□□□ 1.6
DDX60Q8IY21 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.05■■□□□ 1.6
DDX60Q8IY21 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX60Q8IY21 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
DDX60Q8IY21 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
DDX60Q8IY21 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX60Q8IY21 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
DDX60Q8IY21 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX60Q8IY21 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
DDX60Q8IY21 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX60Q8IY21 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX60Q8IY21 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX60Q8IY21 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX60Q8IY21 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
DDX60Q8IY21 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX60Q8IY21 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX60Q8IY21 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 NBPF21P-201ENST00000425093 1451 ntBASIC25.03■■□□□ 1.6
DDX60Q8IY21 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX60Q8IY21 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX60Q8IY21 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms