Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 AC079140.4-201ENST00000507448 529 ntBASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 AP000974.1-201ENST00000623909 2387 ntBASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 EDA-201ENST00000338901 1233 ntBASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUDCD3Q8IVD9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 AC096631.2-201ENST00000436136 790 ntBASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NUDCD3Q8IVD9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 AL354811.1-201ENST00000610286 706 ntBASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 AC106739.1-201ENST00000617035 715 ntBASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUDCD3Q8IVD9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 AC005332.7-201ENST00000614046 2005 ntBASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 KRT8P36-201ENST00000489121 1440 ntBASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 AL355001.2-201ENST00000620617 1191 ntBASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUDCD3Q8IVD9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms