Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 AL121894.2-201ENST00000602977 491 ntBASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA9Q8IUA7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 KRT8P36-201ENST00000489121 1440 ntBASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 ECEL1P2-202ENST00000465689 757 ntBASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 MIR2861-201ENST00000636310 90 ntBASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA9Q8IUA7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA9Q8IUA7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA9Q8IUA7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 FAM87A-204ENST00000613235 858 ntBASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 AL031985.4-201ENST00000642138 673 ntBASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA9Q8IUA7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 FAM8A6P-201ENST00000407496 1135 ntBASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC30.95■■■□□ 2.54
ABCA9Q8IUA7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 AK4P3-201ENST00000418260 669 ntBASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 B3GAT3P1-201ENST00000471720 806 ntBASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.94■■■□□ 2.54
ABCA9Q8IUA7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 AC091076.1-201ENST00000610741 619 ntBASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ABCA9Q8IUA7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 LIN28AP1-201ENST00000429574 405 ntBASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 EGLN1P1-201ENST00000531623 762 ntBASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
ABCA9Q8IUA7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 AC117947.1-201ENST00000427448 529 ntBASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 FSCN1P1-201ENST00000568912 1481 ntBASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 AL445675.2-201ENST00000620291 557 ntBASIC30.91■■■□□ 2.54
ABCA9Q8IUA7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
ABCA9Q8IUA7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
ABCA9Q8IUA7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.9■■■□□ 2.54
ABCA9Q8IUA7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms