Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 KRT19P1-201ENST00000405746 1186 ntBASIC17.9■□□□□ 0.46
LRRC28Q86X40 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 KRT18P61-201ENST00000585825 1298 ntBASIC17.9■□□□□ 0.46
LRRC28Q86X40 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC28Q86X40 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRRC28Q86X40 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC28Q86X40 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 KRT87P-202ENST00000534226 1464 ntBASIC17.89■□□□□ 0.45
LRRC28Q86X40 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRRC28Q86X40 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC28Q86X40 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 IKBKGP1-201ENST00000612193 1073 ntBASIC17.88■□□□□ 0.45
LRRC28Q86X40 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC28Q86X40 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC28Q86X40 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
LRRC28Q86X40 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRC28Q86X40 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRC28Q86X40 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC28Q86X40 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC28Q86X40 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC28Q86X40 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC28Q86X40 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC28Q86X40 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC28Q86X40 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC28Q86X40 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC28Q86X40 AL137784.2-201ENST00000607332 1000 ntBASIC17.86■□□□□ 0.45
LRRC28Q86X40 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.86■□□□□ 0.45
LRRC28Q86X40 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC28Q86X40 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC28Q86X40 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRC28Q86X40 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC28Q86X40 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms