Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KRT87P-202ENST00000534226 1464 ntBASIC20.77■□□□□ 0.92
CCDC25Q86WR0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CCDC25Q86WR0 AC116050.2-201ENST00000612102 1779 ntBASIC20.77■□□□□ 0.91
CCDC25Q86WR0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC25Q86WR0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 KRT16P2-201ENST00000414673 1423 ntBASIC20.76■□□□□ 0.91
CCDC25Q86WR0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC25Q86WR0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AC008406.3-201ENST00000620001 1374 ntBASIC20.75■□□□□ 0.91
CCDC25Q86WR0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 MIR939-201ENST00000401314 82 ntBASIC20.75■□□□□ 0.91
CCDC25Q86WR0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AL355001.2-201ENST00000620617 1191 ntBASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AC120498.10-201ENST00000621827 505 ntBASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AC098818.2-201ENST00000564925 2320 ntBASIC20.75■□□□□ 0.91
CCDC25Q86WR0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC25Q86WR0 AC018445.3-201ENST00000624177 1945 ntBASIC20.74■□□□□ 0.91
CCDC25Q86WR0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 AC020763.4-201ENST00000623414 4170 ntBASIC20.74■□□□□ 0.91
CCDC25Q86WR0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 AC091305.1-201ENST00000479476 895 ntBASIC20.74■□□□□ 0.91
CCDC25Q86WR0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC25Q86WR0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 AL354811.1-201ENST00000610286 706 ntBASIC20.73■□□□□ 0.91
CCDC25Q86WR0 MIR6084-201ENST00000622012 110 ntBASIC20.73■□□□□ 0.91
CCDC25Q86WR0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 DPP3P2-201ENST00000416030 1696 ntBASIC20.73■□□□□ 0.91
CCDC25Q86WR0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms