Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 UNC93B4-201ENST00000505679 747 ntBASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM4Q86VH4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 DPP3P2-201ENST00000416030 1696 ntBASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM4Q86VH4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 AC008403.3-201ENST00000598924 454 ntBASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 AC006557.6-201ENST00000623071 864 ntBASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM4Q86VH4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRTM4Q86VH4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LRRTM4Q86VH4 PTBP1P-201ENST00000554374 1601 ntBASIC19.76■□□□□ 0.75
LRRTM4Q86VH4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms