Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 AC010141.2-201ENST00000452426 721 ntBASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 AL354811.1-201ENST00000610286 706 ntBASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM1Q86UE6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 AC096631.2-201ENST00000436136 790 ntBASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 AF213884.3-201ENST00000563833 479 ntBASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRTM1Q86UE6 AC093484.2-201ENST00000580996 2166 ntBASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 AC091305.1-201ENST00000479476 895 ntBASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 AL355001.2-201ENST00000620617 1191 ntBASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRTM1Q86UE6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 SLC7A5P2-201ENST00000553010 536 ntBASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM1Q86UE6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LRRTM1Q86UE6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.46■□□□□ 0.38
LRRTM1Q86UE6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 AL136967.2-201ENST00000623968 743 ntBASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms