Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC30.34■■■□□ 2.45
CCDC141Q6ZP82 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC141Q6ZP82 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC30.34■■■□□ 2.45
CCDC141Q6ZP82 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC141Q6ZP82 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC141Q6ZP82 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC141Q6ZP82 KRT8P9-201ENST00000558927 1449 ntBASIC30.33■■■□□ 2.45
CCDC141Q6ZP82 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC30.33■■■□□ 2.45
CCDC141Q6ZP82 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.33■■■□□ 2.45
CCDC141Q6ZP82 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC141Q6ZP82 AL024507.2-201ENST00000606070 2574 ntBASIC30.33■■■□□ 2.45
CCDC141Q6ZP82 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC30.33■■■□□ 2.45
CCDC141Q6ZP82 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 AC145285.6-201ENST00000604632 637 ntBASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 AL031963.3-201ENST00000606441 850 ntBASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 MIR6786-201ENST00000616843 113 ntBASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 AC079598.2-202ENST00000546624 1451 ntBASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 AL049796.1-201ENST00000565336 1766 ntBASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC141Q6ZP82 MMP23A-201ENST00000234610 1017 ntBASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 NIFKP9-201ENST00000419265 221 ntBASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC141Q6ZP82 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 TMPOP1-202ENST00000424642 1267 ntBASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 AC004264.1-201ENST00000608354 794 ntBASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC141Q6ZP82 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 AP000525.1-201ENST00000608286 694 ntBASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC141Q6ZP82 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC141Q6ZP82 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC30.28■■■□□ 2.44
CCDC141Q6ZP82 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC141Q6ZP82 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CCDC141Q6ZP82 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC141Q6ZP82 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC141Q6ZP82 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 MYB-221ENST00000527615 2381 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC141Q6ZP82 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.44
CCDC141Q6ZP82 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC141Q6ZP82 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC30.26■■■□□ 2.44
CCDC141Q6ZP82 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC141Q6ZP82 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC30.26■■■□□ 2.43
CCDC141Q6ZP82 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC141Q6ZP82 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC30.26■■■□□ 2.43
CCDC141Q6ZP82 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC141Q6ZP82 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 AP002982.1-201ENST00000492365 877 ntBASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 P4HB-223ENST00000576390 439 ntTSL 4 BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 AL445228.2-201ENST00000605589 952 ntBASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC141Q6ZP82 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms