Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 AC133561.4-201ENST00000566112 224 ntBASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 AC135050.7-201ENST00000624508 2218 ntBASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 AC079598.2-202ENST00000546624 1451 ntBASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 LINC01960-201ENST00000563759 1884 ntBASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 AC093484.2-201ENST00000580996 2166 ntBASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDPF1Q6NVV7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDPF1Q6NVV7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDPF1Q6NVV7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 PCDHA12-202ENST00000613593 2588 ntBASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 AL356309.3-201ENST00000624132 1934 ntBASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.26■□□□□ 0.03
CDPF1Q6NVV7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms