Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIF1Q5UIP0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 COX11P1-201ENST00000489116 835 ntBASIC19.77■□□□□ 0.76
RIF1Q5UIP0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIF1Q5UIP0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIF1Q5UIP0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 AL356652.1-201ENST00000615962 565 ntBASIC19.76■□□□□ 0.75
RIF1Q5UIP0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIF1Q5UIP0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.75■□□□□ 0.75
RIF1Q5UIP0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 AC009078.2-202ENST00000463353 338 ntBASIC19.75■□□□□ 0.75
RIF1Q5UIP0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 AC012313.10-201ENST00000623509 926 ntBASIC19.75■□□□□ 0.75
RIF1Q5UIP0 AC010542.4-201ENST00000563151 1910 ntBASIC19.75■□□□□ 0.75
RIF1Q5UIP0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RIF1Q5UIP0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 AL671883.3-201ENST00000603274 991 ntBASIC19.74■□□□□ 0.75
RIF1Q5UIP0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RIF1Q5UIP0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 AL359075.1-203ENST00000462729 1002 ntBASIC19.73■□□□□ 0.75
RIF1Q5UIP0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 DGCR10-201ENST00000609839 495 ntBASIC19.73■□□□□ 0.75
RIF1Q5UIP0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms