Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 DGCR10-201ENST00000609839 495 ntBASIC17.67■□□□□ 0.42
LRRK2Q5S007 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 AL138966.2-201ENST00000621997 464 ntBASIC17.67■□□□□ 0.42
LRRK2Q5S007 CR769767.2-201ENST00000622735 460 ntBASIC17.67■□□□□ 0.42
LRRK2Q5S007 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 B3GAT3P1-201ENST00000471720 806 ntBASIC17.67■□□□□ 0.42
LRRK2Q5S007 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRK2Q5S007 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRK2Q5S007 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRK2Q5S007 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRK2Q5S007 AC128688.1-201ENST00000487626 519 ntBASIC17.66■□□□□ 0.42
LRRK2Q5S007 FAM86EP-206ENST00000510506 987 ntBASIC17.66■□□□□ 0.42
LRRK2Q5S007 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRK2Q5S007 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRK2Q5S007 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRK2Q5S007 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRK2Q5S007 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRK2Q5S007 AC139530.3-201ENST00000620344 690 ntBASIC17.66■□□□□ 0.42
LRRK2Q5S007 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 CR392000.1-201ENST00000624770 1228 ntBASIC17.65■□□□□ 0.42
LRRK2Q5S007 AC005332.1-201ENST00000577698 1310 ntBASIC17.65■□□□□ 0.42
LRRK2Q5S007 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
LRRK2Q5S007 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRK2Q5S007 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRK2Q5S007 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 AL356652.1-201ENST00000615962 565 ntBASIC17.64■□□□□ 0.41
LRRK2Q5S007 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.64■□□□□ 0.41
LRRK2Q5S007 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 AL121906.2-201ENST00000621597 723 ntBASIC17.64■□□□□ 0.41
LRRK2Q5S007 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 IER3-202ENST00000376377 1350 ntBASIC17.64■□□□□ 0.41
LRRK2Q5S007 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRK2Q5S007 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRK2Q5S007 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRK2Q5S007 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRK2Q5S007 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 KRT17P6-201ENST00000453795 1220 ntBASIC17.64■□□□□ 0.41
LRRK2Q5S007 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRK2Q5S007 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRK2Q5S007 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 AC111152.3-201ENST00000569699 673 ntBASIC17.63■□□□□ 0.41
LRRK2Q5S007 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 CKBP1-201ENST00000565489 1086 ntBASIC17.63■□□□□ 0.41
LRRK2Q5S007 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRK2Q5S007 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRK2Q5S007 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms