Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 AC006970.2-201ENST00000450065 779 ntBASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 MKRN4P-201ENST00000444706 1521 ntBASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CBWD3Q5JTY5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD3Q5JTY5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD3Q5JTY5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 TCF3P1-201ENST00000423021 1937 ntBASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 AL589743.5-201ENST00000616611 1050 ntBASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD3Q5JTY5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 GUSBP6-202ENST00000438529 1198 ntBASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 AC083906.2-201ENST00000511578 360 ntBASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 AFG3L1P-217ENST00000557444 2447 ntBASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD3Q5JTY5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 AL121832.2-201ENST00000610979 668 ntBASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.8■■□□□ 1.08
CBWD3Q5JTY5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 BX276092.2-201ENST00000417668 665 ntBASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD3Q5JTY5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 BX119927.1-201ENST00000636596 1552 ntBASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 NCF1B-203ENST00000435988 1254 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms