Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 AC092368.3-202ENST00000574180 1591 ntBASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 UBE2SP1-201ENST00000450587 669 ntBASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144BQ3MJ40 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC144BQ3MJ40 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 AC073314.1-201ENST00000568729 2216 ntBASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144BQ3MJ40 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 PCDHAC2-203ENST00000615316 3011 ntBASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 AFG3L1P-217ENST00000557444 2447 ntBASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CCDC144BQ3MJ40 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 AP005212.1-201ENST00000581547 1997 ntBASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 RPPH1-201ENST00000516869 333 ntBASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 CYP21A1P-202ENST00000354927 1481 ntBASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC144BQ3MJ40 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC144BQ3MJ40 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC144BQ3MJ40 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC144BQ3MJ40 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CCDC144BQ3MJ40 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms