Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 MCRIP2P1-201ENST00000394346 511 ntBASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 GUSBP6-202ENST00000438529 1198 ntBASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RASGEF1BQ0VAM2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.27■□□□□ 0.52
RASGEF1BQ0VAM2 CYP21A1P-202ENST00000354927 1481 ntBASIC18.27■□□□□ 0.52
RASGEF1BQ0VAM2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RASGEF1BQ0VAM2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RASGEF1BQ0VAM2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RASGEF1BQ0VAM2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RASGEF1BQ0VAM2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RASGEF1BQ0VAM2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 BX276092.2-201ENST00000417668 665 ntBASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 AL355472.2-201ENST00000422958 438 ntBASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 CYP2T3P-201ENST00000601990 817 ntBASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RASGEF1BQ0VAM2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 AL355802.2-201ENST00000402069 882 ntBASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 MIPEPP3-201ENST00000412105 444 ntBASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 PGM5P4-201ENST00000421970 445 ntBASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RASGEF1BQ0VAM2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms