Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.82■■□□□ 1.08
PPP3CAQ08209 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PPP3CAQ08209 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.82■■□□□ 1.08
PPP3CAQ08209 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.82■■□□□ 1.08
PPP3CAQ08209 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PPP3CAQ08209 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CAQ08209 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CAQ08209 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CAQ08209 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CAQ08209 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CAQ08209 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CAQ08209 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PPP3CAQ08209 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PPP3CAQ08209 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.81■■□□□ 1.08
PPP3CAQ08209 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.81■■□□□ 1.08
PPP3CAQ08209 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PPP3CAQ08209 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP3CAQ08209 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PPP3CAQ08209 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP3CAQ08209 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 AL138781.1-201ENST00000566567 1274 ntBASIC21.8■■□□□ 1.08
PPP3CAQ08209 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 AL109923.1-201ENST00000618799 583 ntBASIC21.8■■□□□ 1.08
PPP3CAQ08209 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP3CAQ08209 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.8■■□□□ 1.08
PPP3CAQ08209 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP3CAQ08209 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PPP3CAQ08209 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP3CAQ08209 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.79■■□□□ 1.08
PPP3CAQ08209 SLC29A4P1-201ENST00000398760 971 ntBASIC21.79■■□□□ 1.08
PPP3CAQ08209 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
PPP3CAQ08209 AC098934.4-201ENST00000564127 592 ntBASIC21.79■■□□□ 1.08
PPP3CAQ08209 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.79■■□□□ 1.08
PPP3CAQ08209 AC104771.1-201ENST00000603335 964 ntBASIC21.79■■□□□ 1.08
PPP3CAQ08209 AC092118.2-201ENST00000613495 667 ntBASIC21.79■■□□□ 1.08
PPP3CAQ08209 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP3CAQ08209 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP3CAQ08209 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP3CAQ08209 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP3CAQ08209 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP3CAQ08209 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP3CAQ08209 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP3CAQ08209 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP3CAQ08209 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PPP3CAQ08209 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PPP3CAQ08209 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP3CAQ08209 DUSP5P2-201ENST00000426873 1033 ntBASIC21.77■■□□□ 1.08
PPP3CAQ08209 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms