Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 TUS1YLR425W 3924 nt2.84□□□□□ -1.95
BDF2Q07442 BNR1YIL159W 4128 nt2.84□□□□□ -1.96
BDF2Q07442 UBP15YMR304W 3693 nt2.83□□□□□ -1.96
BDF2Q07442 SPO22YIL073C 2928 nt2.83□□□□□ -1.96
BDF2Q07442 PHO2YDL106C 1680 nt2.83□□□□□ -1.96
BDF2Q07442 YIL071W-AYIL071W-A 477 nt2.83□□□□□ -1.96
BDF2Q07442 LCL1YPL056C 306 nt2.83□□□□□ -1.96
BDF2Q07442 CUL3YGR003W 2235 nt2.83□□□□□ -1.96
BDF2Q07442 OLI1Q0130 231 nt2.82□□□□□ -1.96
BDF2Q07442 VPS55YJR044C 423 nt2.82□□□□□ -1.96
BDF2Q07442 YLR053CYLR053C 327 nt2.82□□□□□ -1.96
BDF2Q07442 YKU80YMR106C 1890 nt2.82□□□□□ -1.96
BDF2Q07442 LRE1YCL051W 1752 nt2.81□□□□□ -1.96
BDF2Q07442 KRE33YNL132W 3171 nt2.81□□□□□ -1.96
BDF2Q07442 ESL2YKR096W 3588 nt2.8□□□□□ -1.96
BDF2Q07442 RIM20YOR275C 1986 nt2.8□□□□□ -1.96
BDF2Q07442 CYB5YNL111C 363 nt2.8□□□□□ -1.96
BDF2Q07442 MGM1YOR211C 2646 nt2.8□□□□□ -1.96
BDF2Q07442 VPH1YOR270C 2523 nt2.8□□□□□ -1.96
BDF2Q07442 AI5_ALPHAQ0070 1893 nt2.79□□□□□ -1.96
BDF2Q07442 PEX8YGR077C 1770 nt2.79□□□□□ -1.96
BDF2Q07442 YDR544CYDR544C 429 nt2.79□□□□□ -1.96
BDF2Q07442 YOR015WYOR015W 360 nt2.79□□□□□ -1.96
BDF2Q07442 HHT1YBR010W 411 nt2.79□□□□□ -1.96
BDF2Q07442 ZRG8YER033C 3231 nt2.78□□□□□ -1.96
BDF2Q07442 PSD2YGR170W 3417 nt2.78□□□□□ -1.96
BDF2Q07442 snR60snR60 104 nt2.78□□□□□ -1.96
BDF2Q07442 YGL217CYGL217C 342 nt2.78□□□□□ -1.96
BDF2Q07442 YMR321CYMR321C 318 nt2.78□□□□□ -1.96
BDF2Q07442 STB4YMR019W 2850 nt2.78□□□□□ -1.97
BDF2Q07442 YNL097C-BYNL097C-B 123 nt2.77□□□□□ -1.97
BDF2Q07442 SET2YJL168C 2202 nt2.77□□□□□ -1.97
BDF2Q07442 SGM1YJR134C 2124 nt2.77□□□□□ -1.97
BDF2Q07442 SLM1YIL105C 2061 nt2.77□□□□□ -1.97
BDF2Q07442 SRO77YBL106C 3033 nt2.76□□□□□ -1.97
BDF2Q07442 YDL247W-AYDL247W-A 75 nt2.76□□□□□ -1.97
BDF2Q07442 TFB5YDR079C-A 219 nt2.76□□□□□ -1.97
BDF2Q07442 YDR286CYDR286C 345 nt2.76□□□□□ -1.97
BDF2Q07442 YOR333CYOR333C 417 nt2.76□□□□□ -1.97
BDF2Q07442 ACM1YPL267W 630 nt2.76□□□□□ -1.97
BDF2Q07442 MET18YIL128W 3099 nt2.76□□□□□ -1.97
BDF2Q07442 SAP190YKR028W 3102 nt2.75□□□□□ -1.97
BDF2Q07442 ESC1YMR219W 4977 nt2.75□□□□□ -1.97
BDF2Q07442 TOR1YJR066W 7413 nt2.75□□□□□ -1.97
BDF2Q07442 YLL007CYLL007C 1998 nt2.75□□□□□ -1.97
BDF2Q07442 PCC1YKR095W-A 267 nt2.75□□□□□ -1.97
BDF2Q07442 PAU8YAL068C 363 nt2.75□□□□□ -1.97
BDF2Q07442 PAU20YOL161C 363 nt2.75□□□□□ -1.97
BDF2Q07442 YDR239CYDR239C 2364 nt2.75□□□□□ -1.97
BDF2Q07442 SCD5YOR329C 2619 nt2.74□□□□□ -1.97
BDF2Q07442 HYP2YEL034W 474 nt2.74□□□□□ -1.97
BDF2Q07442 BRP1YGL007W 378 nt2.74□□□□□ -1.97
BDF2Q07442 YHL041WYHL041W 450 nt2.74□□□□□ -1.97
BDF2Q07442 YMR326CYMR326C 309 nt2.74□□□□□ -1.97
BDF2Q07442 MNE1YOR350C 1992 nt2.74□□□□□ -1.97
BDF2Q07442 EFR3YMR212C 2349 nt2.73□□□□□ -1.97
BDF2Q07442 YLR120W-AYLR120W-A 102 nt2.73□□□□□ -1.97
BDF2Q07442 YLR146W-AYLR146W-A 189 nt2.73□□□□□ -1.97
BDF2Q07442 NUT2YPR168W 474 nt2.73□□□□□ -1.97
BDF2Q07442 snR52snR52 92 nt2.73□□□□□ -1.97
BDF2Q07442 GRR1YJR090C 3456 nt2.72□□□□□ -1.97
BDF2Q07442 MDM20YOL076W 2391 nt2.72□□□□□ -1.97
BDF2Q07442 VMR1YHL035C 4779 nt2.72□□□□□ -1.97
BDF2Q07442 RPS27BYHR021C 249 nt2.72□□□□□ -1.97
BDF2Q07442 YLR154W-AYLR154W-A 186 nt2.72□□□□□ -1.97
BDF2Q07442 VPS34YLR240W 2628 nt2.72□□□□□ -1.97
BDF2Q07442 RPS17AYML024W 411 nt2.72□□□□□ -1.97
BDF2Q07442 YOR381W-AYOR381W-A 168 nt2.72□□□□□ -1.97
BDF2Q07442 SAR1YPL218W 573 nt2.72□□□□□ -1.97
BDF2Q07442 snR46snR46 197 nt2.72□□□□□ -1.97
BDF2Q07442 TRA1YHR099W 11235 nt2.72□□□□□ -1.97
BDF2Q07442 RPL42BYHR141C 321 nt2.71□□□□□ -1.98
BDF2Q07442 INA22YIR024C 651 nt2.71□□□□□ -1.98
BDF2Q07442 RPL42AYNL162W 321 nt2.71□□□□□ -1.98
BDF2Q07442 YPR063CYPR063C 423 nt2.71□□□□□ -1.98
BDF2Q07442 CLN3YAL040C 1743 nt2.71□□□□□ -1.98
BDF2Q07442 SWI6YLR182W 2412 nt2.7□□□□□ -1.98
BDF2Q07442 YDR426CYDR426C 378 nt2.7□□□□□ -1.98
BDF2Q07442 YHR217CYHR217C 462 nt2.7□□□□□ -1.98
BDF2Q07442 YNL114CYNL114C 372 nt2.7□□□□□ -1.98
BDF2Q07442 IRR1YIL026C 3453 nt2.7□□□□□ -1.98
BDF2Q07442 YCR102W-AYCR102W-A 198 nt2.69□□□□□ -1.98
BDF2Q07442 EMP24YGL200C 612 nt2.69□□□□□ -1.98
BDF2Q07442 RPL38YLR325C 237 nt2.69□□□□□ -1.98
BDF2Q07442 YBR131C-AYBR131C-A 90 nt2.69□□□□□ -1.98
BDF2Q07442 PRP42YDR235W 1635 nt2.68□□□□□ -1.98
BDF2Q07442 COS111YBR203W 2775 nt2.68□□□□□ -1.98
BDF2Q07442 UBR1YGR184C 5853 nt2.68□□□□□ -1.98
BDF2Q07442 YCR043CYCR043C 384 nt2.68□□□□□ -1.98
BDF2Q07442 VPS8YAL002W 3825 nt2.68□□□□□ -1.98
BDF2Q07442 RRT15YLR162W-A 189 nt2.68□□□□□ -1.98
BDF2Q07442 YOR394C-AYOR394C-A 168 nt2.68□□□□□ -1.98
BDF2Q07442 HDA3YPR179C 1968 nt2.68□□□□□ -1.98
BDF2Q07442 UPS1YLR193C 528 nt2.67□□□□□ -1.98
BDF2Q07442 YNL028WYNL028W 318 nt2.67□□□□□ -1.98
BDF2Q07442 YHR210CYHR210C 1026 nt2.66□□□□□ -1.98
BDF2Q07442 CSE2YNR010W 450 nt2.66□□□□□ -1.98
BDF2Q07442 TRL1YJL087C 2484 nt2.66□□□□□ -1.98
BDF2Q07442 KIP1YBL063W 3336 nt2.66□□□□□ -1.98
BDF2Q07442 CDC60YPL160W 3273 nt2.66□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms