Protein–RNA interactions for Protein: Q06224

YSH1, Endoribonuclease YSH1, yeastyeast

Predicted RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSH1Q06224 YMR172C-AYMR172C-A 384 nt2.34□□□□□ -2.03
YSH1Q06224 DNF1YER166W 4716 nt2.34□□□□□ -2.03
YSH1Q06224 VPS13YLL040C 9435 nt2.34□□□□□ -2.04
YSH1Q06224 RAV1YJR033C 4074 nt2.34□□□□□ -2.04
YSH1Q06224 SMY1YKL079W 1971 nt2.34□□□□□ -2.04
YSH1Q06224 VMR1YHL035C 4779 nt2.33□□□□□ -2.04
YSH1Q06224 RRP6YOR001W 2202 nt2.33□□□□□ -2.04
YSH1Q06224 PXA2YKL188C 2562 nt2.33□□□□□ -2.04
YSH1Q06224 KAP123YER110C 3342 nt2.33□□□□□ -2.04
YSH1Q06224 CYB5YNL111C 363 nt2.33□□□□□ -2.04
YSH1Q06224 YPR002C-AYPR002C-A 198 nt2.33□□□□□ -2.04
YSH1Q06224 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
YSH1Q06224 GRR1YJR090C 3456 nt2.33□□□□□ -2.04
YSH1Q06224 VPH1YOR270C 2523 nt2.32□□□□□ -2.04
YSH1Q06224 SPP41YDR464W 4308 nt2.32□□□□□ -2.04
YSH1Q06224 YNL114CYNL114C 372 nt2.32□□□□□ -2.04
YSH1Q06224 EFR3YMR212C 2349 nt2.32□□□□□ -2.04
YSH1Q06224 SAP185YJL098W 3177 nt2.32□□□□□ -2.04
YSH1Q06224 CRM1YGR218W 3255 nt2.32□□□□□ -2.04
YSH1Q06224 GPG1YGL121C 381 nt2.31□□□□□ -2.04
YSH1Q06224 YBL083CYBL083C 426 nt2.31□□□□□ -2.04
YSH1Q06224 TOR1YJR066W 7413 nt2.31□□□□□ -2.04
YSH1Q06224 SSQ1YLR369W 1974 nt2.3□□□□□ -2.04
YSH1Q06224 NEO1YIL048W 3456 nt2.3□□□□□ -2.04
YSH1Q06224 SCH9YHR205W 2475 nt2.3□□□□□ -2.04
YSH1Q06224 RPL42BYHR141C 321 nt2.3□□□□□ -2.04
YSH1Q06224 TRX1YLR043C 312 nt2.3□□□□□ -2.04
YSH1Q06224 YLR146W-AYLR146W-A 189 nt2.3□□□□□ -2.04
YSH1Q06224 RPS17AYML024W 411 nt2.3□□□□□ -2.04
YSH1Q06224 RPL42AYNL162W 321 nt2.3□□□□□ -2.04
YSH1Q06224 CDC53YDL132W 2448 nt2.3□□□□□ -2.04
YSH1Q06224 CFT2YLR115W 2580 nt2.3□□□□□ -2.04
YSH1Q06224 PUT3YKL015W 2940 nt2.3□□□□□ -2.04
YSH1Q06224 SAP190YKR028W 3102 nt2.29□□□□□ -2.04
YSH1Q06224 SSS1YDR086C 243 nt2.29□□□□□ -2.04
YSH1Q06224 PAU2YEL049W 363 nt2.29□□□□□ -2.04
YSH1Q06224 YNL028WYNL028W 318 nt2.29□□□□□ -2.04
YSH1Q06224 UBP2YOR124C 3819 nt2.29□□□□□ -2.04
YSH1Q06224 YOR302WYOR302W 78 nt2.29□□□□□ -2.04
YSH1Q06224 IST2YBR086C 2841 nt2.29□□□□□ -2.04
YSH1Q06224 TFC3YAL001C 3483 nt2.29□□□□□ -2.04
YSH1Q06224 SNF5YBR289W 2718 nt2.28□□□□□ -2.04
YSH1Q06224 LCD1YDR499W 2244 nt2.28□□□□□ -2.04
YSH1Q06224 ISD11YER048W-A 285 nt2.28□□□□□ -2.04
YSH1Q06224 PFD1YJL179W 330 nt2.28□□□□□ -2.04
YSH1Q06224 YJL197C-AYJL197C-A 282 nt2.28□□□□□ -2.04
YSH1Q06224 ATP7YKL016C 525 nt2.28□□□□□ -2.04
YSH1Q06224 CSE2YNR010W 450 nt2.28□□□□□ -2.04
YSH1Q06224 YOR015WYOR015W 360 nt2.28□□□□□ -2.04
YSH1Q06224 YOR394C-AYOR394C-A 168 nt2.28□□□□□ -2.04
YSH1Q06224 AGC1YPR021C 2709 nt2.28□□□□□ -2.04
YSH1Q06224 MGM1YOR211C 2646 nt2.28□□□□□ -2.04
YSH1Q06224 GCN2YDR283C 4980 nt2.28□□□□□ -2.05
YSH1Q06224 PLC1YPL268W 2610 nt2.27□□□□□ -2.05
YSH1Q06224 MNL2YLR057W 2550 nt2.27□□□□□ -2.05
YSH1Q06224 RPH1YER169W 2391 nt2.27□□□□□ -2.05
YSH1Q06224 YGL052WYGL052W 306 nt2.27□□□□□ -2.05
YSH1Q06224 INA22YIR024C 651 nt2.27□□□□□ -2.05
YSH1Q06224 YLR120W-AYLR120W-A 102 nt2.27□□□□□ -2.05
YSH1Q06224 CLN3YAL040C 1743 nt2.27□□□□□ -2.05
YSH1Q06224 tF(GAA)QtF(GAA)Q 75 nt2.26□□□□□ -2.05
YSH1Q06224 YMR230W-AYMR230W-A 189 nt2.26□□□□□ -2.05
YSH1Q06224 SET2YJL168C 2202 nt2.26□□□□□ -2.05
YSH1Q06224 GIS1YDR096W 2685 nt2.25□□□□□ -2.05
YSH1Q06224 SEC16YPL085W 6588 nt2.25□□□□□ -2.05
YSH1Q06224 VIK1YPL253C 1944 nt2.25□□□□□ -2.05
YSH1Q06224 YJL135WYJL135W 318 nt2.25□□□□□ -2.05
YSH1Q06224 YLR154W-AYLR154W-A 186 nt2.25□□□□□ -2.05
YSH1Q06224 YLR466C-BYLR466C-B 117 nt2.25□□□□□ -2.05
YSH1Q06224 INP2YMR163C 2118 nt2.25□□□□□ -2.05
YSH1Q06224 YOR011W-AYOR011W-A 207 nt2.25□□□□□ -2.05
YSH1Q06224 IRR1YIL026C 3453 nt2.25□□□□□ -2.05
YSH1Q06224 ATG11YPR049C 3537 nt2.24□□□□□ -2.05
YSH1Q06224 SIR4YDR227W 4077 nt2.24□□□□□ -2.05
YSH1Q06224 YJL182CYJL182C 318 nt2.24□□□□□ -2.05
YSH1Q06224 YMR321CYMR321C 318 nt2.24□□□□□ -2.05
YSH1Q06224 MUK1YPL070W 1839 nt2.24□□□□□ -2.05
YSH1Q06224 SLM1YIL105C 2061 nt2.23□□□□□ -2.05
YSH1Q06224 UBR1YGR184C 5853 nt2.23□□□□□ -2.05
YSH1Q06224 YDL185C-AYDL185C-A 228 nt2.22□□□□□ -2.05
YSH1Q06224 YDR286CYDR286C 345 nt2.22□□□□□ -2.05
YSH1Q06224 SWI5YDR146C 2130 nt2.21□□□□□ -2.06
YSH1Q06224 RFX1YLR176C 2436 nt2.21□□□□□ -2.06
YSH1Q06224 SWI6YLR182W 2412 nt2.21□□□□□ -2.06
YSH1Q06224 SSD1YDR293C 3753 nt2.21□□□□□ -2.06
YSH1Q06224 YCR043CYCR043C 384 nt2.21□□□□□ -2.06
YSH1Q06224 BRP1YGL007W 378 nt2.21□□□□□ -2.06
YSH1Q06224 SPT21YMR179W 2277 nt2.21□□□□□ -2.06
YSH1Q06224 LRE1YCL051W 1752 nt2.21□□□□□ -2.06
YSH1Q06224 UTP22YGR090W 3714 nt2.2□□□□□ -2.06
YSH1Q06224 MPT5YGL178W 2580 nt2.2□□□□□ -2.06
YSH1Q06224 AI5_ALPHAQ0070 1893 nt2.2□□□□□ -2.06
YSH1Q06224 PDE2YOR360C 1581 nt2.2□□□□□ -2.06
YSH1Q06224 YHR073W-AYHR073W-A 177 nt2.2□□□□□ -2.06
YSH1Q06224 YJL052C-AYJL052C-A 120 nt2.2□□□□□ -2.06
YSH1Q06224 PAU18YLL064C 363 nt2.2□□□□□ -2.06
YSH1Q06224 TMA7YLR262C-A 195 nt2.2□□□□□ -2.06
YSH1Q06224 PAU6YNR076W 363 nt2.2□□□□□ -2.06
YSH1Q06224 ATG9YDL149W 2994 nt2.19□□□□□ -2.06
YSH1Q06224 ZRG8YER033C 3231 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 41.4 ms