Protein–RNA interactions for Protein: Q04712

RRN11, RNA polymerase I-specific transcription initiation factor RRN11, yeastyeast

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRN11Q04712 YHR007C-AYHR007C-A 216 nt1.79□□□□□ -2.12
RRN11Q04712 RKM1YPL208W 1752 nt1.79□□□□□ -2.12
RRN11Q04712 PEP3YLR148W 2757 nt1.78□□□□□ -2.12
RRN11Q04712 YCR087C-AYCR087C-A 462 nt1.78□□□□□ -2.12
RRN11Q04712 YDR286CYDR286C 345 nt1.78□□□□□ -2.12
RRN11Q04712 YMR031W-AYMR031W-A 327 nt1.78□□□□□ -2.12
RRN11Q04712 TBS1YBR150C 3285 nt1.78□□□□□ -2.12
RRN11Q04712 SOK2YMR016C 2358 nt1.78□□□□□ -2.12
RRN11Q04712 SET2YJL168C 2202 nt1.78□□□□□ -2.13
RRN11Q04712 SEF1YBL066C 3447 nt1.78□□□□□ -2.13
RRN11Q04712 VPS34YLR240W 2628 nt1.77□□□□□ -2.13
RRN11Q04712 NOP53YPL146C 1368 nt1.77□□□□□ -2.13
RRN11Q04712 YDR008CYDR008C 351 nt1.77□□□□□ -2.13
RRN11Q04712 MCM22YJR135C 720 nt1.77□□□□□ -2.13
RRN11Q04712 IRC20YLR247C 4671 nt1.77□□□□□ -2.13
RRN11Q04712 ARP7YPR034W 1434 nt1.76□□□□□ -2.13
RRN11Q04712 TOF2YKR010C 2316 nt1.76□□□□□ -2.13
RRN11Q04712 RPL42BYHR141C 321 nt1.76□□□□□ -2.13
RRN11Q04712 RPL42AYNL162W 321 nt1.76□□□□□ -2.13
RRN11Q04712 MVP1YMR004W 1536 nt1.76□□□□□ -2.13
RRN11Q04712 RIC1YLR039C 3171 nt1.75□□□□□ -2.13
RRN11Q04712 FMP23YBR047W 528 nt1.75□□□□□ -2.13
RRN11Q04712 ADR1YDR216W 3972 nt1.74□□□□□ -2.13
RRN11Q04712 CRM1YGR218W 3255 nt1.74□□□□□ -2.13
RRN11Q04712 DCP2YNL118C 2913 nt1.74□□□□□ -2.13
RRN11Q04712 STE5YDR103W 2754 nt1.74□□□□□ -2.13
RRN11Q04712 YBR184WYBR184W 1572 nt1.74□□□□□ -2.13
RRN11Q04712 ANS1YHR126C 480 nt1.74□□□□□ -2.13
RRN11Q04712 TRM3YDL112W 4311 nt1.74□□□□□ -2.13
RRN11Q04712 OSH6YKR003W 1347 nt1.73□□□□□ -2.13
RRN11Q04712 YDL062WYDL062W 426 nt1.73□□□□□ -2.13
RRN11Q04712 YFL063WYFL063W 456 nt1.73□□□□□ -2.13
RRN11Q04712 UPS1YLR193C 528 nt1.73□□□□□ -2.13
RRN11Q04712 YMR272W-BYMR272W-B 108 nt1.73□□□□□ -2.13
RRN11Q04712 PXA2YKL188C 2562 nt1.73□□□□□ -2.13
RRN11Q04712 NAM7YMR080C 2916 nt1.73□□□□□ -2.13
RRN11Q04712 snR65snR65 100 nt1.72□□□□□ -2.13
RRN11Q04712 YDR183C-AYDR183C-A 258 nt1.72□□□□□ -2.13
RRN11Q04712 YIL059CYIL059C 366 nt1.72□□□□□ -2.13
RRN11Q04712 RPS27AYKL156W 249 nt1.72□□□□□ -2.13
RRN11Q04712 PAU18YLL064C 363 nt1.72□□□□□ -2.13
RRN11Q04712 YNL114CYNL114C 372 nt1.72□□□□□ -2.13
RRN11Q04712 PAU6YNR076W 363 nt1.72□□□□□ -2.13
RRN11Q04712 YCL046WYCL046W 324 nt1.72□□□□□ -2.13
RRN11Q04712 PLC1YPL268W 2610 nt1.72□□□□□ -2.13
RRN11Q04712 YJR039WYJR039W 3366 nt1.72□□□□□ -2.13
RRN11Q04712 YCR043CYCR043C 384 nt1.71□□□□□ -2.14
RRN11Q04712 YDR048CYDR048C 315 nt1.71□□□□□ -2.14
RRN11Q04712 CYC7YEL039C 342 nt1.71□□□□□ -2.14
RRN11Q04712 YAR029WYAR029W 225 nt1.71□□□□□ -2.14
RRN11Q04712 TAR1YLR154W-C 375 nt1.71□□□□□ -2.14
RRN11Q04712 MNL2YLR057W 2550 nt1.71□□□□□ -2.14
RRN11Q04712 YCR022CYCR022C 345 nt1.7□□□□□ -2.14
RRN11Q04712 YDR169C-AYDR169C-A 150 nt1.7□□□□□ -2.14
RRN11Q04712 NUT2YPR168W 474 nt1.7□□□□□ -2.14
RRN11Q04712 CFT1YDR301W 4074 nt1.7□□□□□ -2.14
RRN11Q04712 TDA9YML081W 3756 nt1.7□□□□□ -2.14
RRN11Q04712 SMY1YKL079W 1971 nt1.69□□□□□ -2.14
RRN11Q04712 HDA3YPR179C 1968 nt1.69□□□□□ -2.14
RRN11Q04712 YIL115W-AYIL115W-A 372 nt1.69□□□□□ -2.14
RRN11Q04712 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
RRN11Q04712 SLM1YIL105C 2061 nt1.68□□□□□ -2.14
RRN11Q04712 SPC110YDR356W 2835 nt1.68□□□□□ -2.14
RRN11Q04712 CHS1YNL192W 3396 nt1.68□□□□□ -2.14
RRN11Q04712 YJL135WYJL135W 318 nt1.68□□□□□ -2.14
RRN11Q04712 HTB2YBL002W 396 nt1.68□□□□□ -2.14
RRN11Q04712 YMR290W-AYMR290W-A 348 nt1.68□□□□□ -2.14
RRN11Q04712 PET309YLR067C 2898 nt1.68□□□□□ -2.14
RRN11Q04712 YLR422WYLR422W 5799 nt1.68□□□□□ -2.14
RRN11Q04712 MSH3YCR092C 3057 nt1.68□□□□□ -2.14
RRN11Q04712 RTP1YMR185W 2946 nt1.67□□□□□ -2.14
RRN11Q04712 HIR3YJR140C 4947 nt1.67□□□□□ -2.14
RRN11Q04712 HHT1YBR010W 411 nt1.67□□□□□ -2.14
RRN11Q04712 RPH1YER169W 2391 nt1.67□□□□□ -2.14
RRN11Q04712 POL5YEL055C 3069 nt1.67□□□□□ -2.14
RRN11Q04712 MDM20YOL076W 2391 nt1.66□□□□□ -2.14
RRN11Q04712 YHR073W-AYHR073W-A 177 nt1.66□□□□□ -2.14
RRN11Q04712 RPL39YJL189W 156 nt1.66□□□□□ -2.14
RRN11Q04712 YMR230W-AYMR230W-A 189 nt1.66□□□□□ -2.14
RRN11Q04712 CYB5YNL111C 363 nt1.66□□□□□ -2.14
RRN11Q04712 YOR282WYOR282W 321 nt1.66□□□□□ -2.14
RRN11Q04712 YBR174CYBR174C 315 nt1.66□□□□□ -2.14
RRN11Q04712 DBP6YNR038W 1890 nt1.65□□□□□ -2.14
RRN11Q04712 SNF5YBR289W 2718 nt1.65□□□□□ -2.15
RRN11Q04712 YGR109W-BYGR109W-B 4644 nt1.65□□□□□ -2.15
RRN11Q04712 IRR1YIL026C 3453 nt1.65□□□□□ -2.15
RRN11Q04712 IRA1YBR140C 9279 nt1.64□□□□□ -2.15
RRN11Q04712 SWI5YDR146C 2130 nt1.64□□□□□ -2.15
RRN11Q04712 SRP14YDL092W 441 nt1.64□□□□□ -2.15
RRN11Q04712 YDR366CYDR366C 399 nt1.64□□□□□ -2.15
RRN11Q04712 YOR019WYOR019W 2193 nt1.64□□□□□ -2.15
RRN11Q04712 KCS1YDR017C 3153 nt1.63□□□□□ -2.15
RRN11Q04712 snR72snR72 98 nt1.63□□□□□ -2.15
RRN11Q04712 YDR003W-AYDR003W-A 123 nt1.63□□□□□ -2.15
RRN11Q04712 YDR344CYDR344C 444 nt1.63□□□□□ -2.15
RRN11Q04712 YDR426CYDR426C 378 nt1.63□□□□□ -2.15
RRN11Q04712 YKL183C-AYKL183C-A 213 nt1.63□□□□□ -2.15
RRN11Q04712 YLR146W-AYLR146W-A 189 nt1.63□□□□□ -2.15
RRN11Q04712 RPL38YLR325C 237 nt1.63□□□□□ -2.15
RRN11Q04712 snR51snR51 107 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 48.6 ms