Protein–RNA interactions for Protein: Q03654

CEF1, Pre-mRNA-splicing factor CEF1, yeastyeast

Predicted RBP Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEF1Q03654 MNL2YLR057W 2550 nt2.33□□□□□ -2.04
CEF1Q03654 YGL188C-AYGL188C-A 141 nt2.33□□□□□ -2.04
CEF1Q03654 YAL059C-AYAL059C-A 423 nt2.33□□□□□ -2.04
CEF1Q03654 YBL083CYBL083C 426 nt2.33□□□□□ -2.04
CEF1Q03654 RPH1YER169W 2391 nt2.33□□□□□ -2.04
CEF1Q03654 ARP7YPR034W 1434 nt2.33□□□□□ -2.04
CEF1Q03654 TOR2YKL203C 7425 nt2.33□□□□□ -2.04
CEF1Q03654 RIM20YOR275C 1986 nt2.32□□□□□ -2.04
CEF1Q03654 PEX8YGR077C 1770 nt2.32□□□□□ -2.04
CEF1Q03654 NPC2YDL046W 522 nt2.32□□□□□ -2.04
CEF1Q03654 RPL38YLR325C 237 nt2.32□□□□□ -2.04
CEF1Q03654 NOP14YDL148C 2433 nt2.32□□□□□ -2.04
CEF1Q03654 YLL032CYLL032C 2478 nt2.32□□□□□ -2.04
CEF1Q03654 MDM20YOL076W 2391 nt2.31□□□□□ -2.04
CEF1Q03654 MGA2YIR033W 3342 nt2.31□□□□□ -2.04
CEF1Q03654 VPS34YLR240W 2628 nt2.31□□□□□ -2.04
CEF1Q03654 YDL211CYDL211C 1119 nt2.31□□□□□ -2.04
CEF1Q03654 BRP1YGL007W 378 nt2.31□□□□□ -2.04
CEF1Q03654 HHT1YBR010W 411 nt2.31□□□□□ -2.04
CEF1Q03654 YBR184WYBR184W 1572 nt2.31□□□□□ -2.04
CEF1Q03654 YOR343W-BYOR343W-B 5313 nt2.3□□□□□ -2.04
CEF1Q03654 SAP190YKR028W 3102 nt2.3□□□□□ -2.04
CEF1Q03654 HCS1YKL017C 2052 nt2.3□□□□□ -2.04
CEF1Q03654 PXA2YKL188C 2562 nt2.3□□□□□ -2.04
CEF1Q03654 UTP22YGR090W 3714 nt2.3□□□□□ -2.04
CEF1Q03654 SLM1YIL105C 2061 nt2.29□□□□□ -2.04
CEF1Q03654 YCR018C-AYCR018C-A 255 nt2.29□□□□□ -2.04
CEF1Q03654 YPR063CYPR063C 423 nt2.29□□□□□ -2.04
CEF1Q03654 YCL023CYCL023C 348 nt2.29□□□□□ -2.04
CEF1Q03654 YCR043CYCR043C 384 nt2.28□□□□□ -2.04
CEF1Q03654 YGR265WYGR265W 411 nt2.28□□□□□ -2.04
CEF1Q03654 RPL42BYHR141C 321 nt2.28□□□□□ -2.04
CEF1Q03654 YJL052C-AYJL052C-A 120 nt2.28□□□□□ -2.04
CEF1Q03654 YKL183C-AYKL183C-A 213 nt2.28□□□□□ -2.04
CEF1Q03654 YLR255CYLR255C 354 nt2.28□□□□□ -2.04
CEF1Q03654 YML007C-AYML007C-A 111 nt2.28□□□□□ -2.04
CEF1Q03654 RPL42AYNL162W 321 nt2.28□□□□□ -2.04
CEF1Q03654 YMR045CYMR045C 5268 nt2.28□□□□□ -2.04
CEF1Q03654 SMY1YKL079W 1971 nt2.28□□□□□ -2.04
CEF1Q03654 COG8YML071C 1824 nt2.27□□□□□ -2.05
CEF1Q03654 YDR426CYDR426C 378 nt2.27□□□□□ -2.05
CEF1Q03654 YNL114CYNL114C 372 nt2.27□□□□□ -2.05
CEF1Q03654 YOR225WYOR225W 330 nt2.27□□□□□ -2.05
CEF1Q03654 YBR064WYBR064W 429 nt2.27□□□□□ -2.05
CEF1Q03654 snR49snR49 165 nt2.27□□□□□ -2.05
CEF1Q03654 SLN1YIL147C 3663 nt2.27□□□□□ -2.05
CEF1Q03654 snR60snR60 104 nt2.26□□□□□ -2.05
CEF1Q03654 YHL042WYHL042W 453 nt2.26□□□□□ -2.05
CEF1Q03654 SDH2YLL041C 801 nt2.26□□□□□ -2.05
CEF1Q03654 ABF2YMR072W 552 nt2.26□□□□□ -2.05
CEF1Q03654 HSL1YKL101W 4557 nt2.25□□□□□ -2.05
CEF1Q03654 CDC36YDL165W 576 nt2.25□□□□□ -2.05
CEF1Q03654 tM(CAU)Q1tM(CAU)Q1 76 nt2.25□□□□□ -2.05
CEF1Q03654 YHR073W-AYHR073W-A 177 nt2.25□□□□□ -2.05
CEF1Q03654 PCC1YKR095W-A 267 nt2.25□□□□□ -2.05
CEF1Q03654 YOR008C-AYOR008C-A 225 nt2.25□□□□□ -2.05
CEF1Q03654 ZRG8YER033C 3231 nt2.25□□□□□ -2.05
CEF1Q03654 EFR3YMR212C 2349 nt2.25□□□□□ -2.05
CEF1Q03654 SSQ1YLR369W 1974 nt2.25□□□□□ -2.05
CEF1Q03654 YDL118WYDL118W 381 nt2.24□□□□□ -2.05
CEF1Q03654 TMA7YLR262C-A 195 nt2.24□□□□□ -2.05
CEF1Q03654 YPR002C-AYPR002C-A 198 nt2.24□□□□□ -2.05
CEF1Q03654 SNF5YBR289W 2718 nt2.23□□□□□ -2.05
CEF1Q03654 YCR102W-AYCR102W-A 198 nt2.23□□□□□ -2.05
CEF1Q03654 EMP24YGL200C 612 nt2.23□□□□□ -2.05
CEF1Q03654 YJL135WYJL135W 318 nt2.23□□□□□ -2.05
CEF1Q03654 YLR146W-AYLR146W-A 189 nt2.23□□□□□ -2.05
CEF1Q03654 GCN2YDR283C 4980 nt2.23□□□□□ -2.05
CEF1Q03654 YGR250CYGR250C 2346 nt2.23□□□□□ -2.05
CEF1Q03654 SCW11YGL028C 1629 nt2.22□□□□□ -2.05
CEF1Q03654 SSS1YDR086C 243 nt2.22□□□□□ -2.05
CEF1Q03654 YHR071C-AYHR071C-A 321 nt2.22□□□□□ -2.05
CEF1Q03654 BLI1YKL061W 342 nt2.22□□□□□ -2.05
CEF1Q03654 YNL337WYNL337W 255 nt2.22□□□□□ -2.05
CEF1Q03654 NPR2YEL062W 1848 nt2.21□□□□□ -2.05
CEF1Q03654 PUT3YKL015W 2940 nt2.21□□□□□ -2.05
CEF1Q03654 BRE1YDL074C 2103 nt2.21□□□□□ -2.06
CEF1Q03654 PAU18YLL064C 363 nt2.21□□□□□ -2.06
CEF1Q03654 PAU6YNR076W 363 nt2.21□□□□□ -2.06
CEF1Q03654 IRR1YIL026C 3453 nt2.2□□□□□ -2.06
CEF1Q03654 MYO4YAL029C 4416 nt2.2□□□□□ -2.06
CEF1Q03654 YER088C-AYER088C-A 324 nt2.2□□□□□ -2.06
CEF1Q03654 INA22YIR024C 651 nt2.2□□□□□ -2.06
CEF1Q03654 TRX1YLR043C 312 nt2.2□□□□□ -2.06
CEF1Q03654 YOR015WYOR015W 360 nt2.2□□□□□ -2.06
CEF1Q03654 YCL046WYCL046W 324 nt2.2□□□□□ -2.06
CEF1Q03654 SPP41YDR464W 4308 nt2.2□□□□□ -2.06
CEF1Q03654 YHR214C-BYHR214C-B 5382 nt2.2□□□□□ -2.06
CEF1Q03654 YJR039WYJR039W 3366 nt2.19□□□□□ -2.06
CEF1Q03654 HIR3YJR140C 4947 nt2.19□□□□□ -2.06
CEF1Q03654 YOL155W-AYOL155W-A 135 nt2.19□□□□□ -2.06
CEF1Q03654 SEC63YOR254C 1992 nt2.19□□□□□ -2.06
CEF1Q03654 INO80YGL150C 4470 nt2.19□□□□□ -2.06
CEF1Q03654 SWI5YDR146C 2130 nt2.18□□□□□ -2.06
CEF1Q03654 snR72snR72 98 nt2.18□□□□□ -2.06
CEF1Q03654 IES4YOR189W 351 nt2.18□□□□□ -2.06
CEF1Q03654 FKS1YLR342W 5631 nt2.18□□□□□ -2.06
CEF1Q03654 YNL144CYNL144C 2223 nt2.18□□□□□ -2.06
CEF1Q03654 Q0032Q0032 291 nt2.17□□□□□ -2.06
CEF1Q03654 YMR172C-AYMR172C-A 384 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms