Protein–RNA interactions for Protein: Q01064

PDE1B, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, humanhuman

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1BQ01064 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1BQ01064 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDE1BQ01064 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1BQ01064 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1BQ01064 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1BQ01064 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1BQ01064 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.57■□□□□ 0.88
PDE1BQ01064 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1BQ01064 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE1BQ01064 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE1BQ01064 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PDE1BQ01064 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1BQ01064 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE1BQ01064 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1BQ01064 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PDE1BQ01064 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1BQ01064 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1BQ01064 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PDE1BQ01064 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1BQ01064 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1BQ01064 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1BQ01064 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1BQ01064 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE1BQ01064 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE1BQ01064 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE1BQ01064 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PDE1BQ01064 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1BQ01064 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1BQ01064 AL512408.1-201ENST00000569378 2000 ntBASIC20.55■□□□□ 0.88
PDE1BQ01064 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE1BQ01064 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1BQ01064 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
PDE1BQ01064 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE1BQ01064 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.55■□□□□ 0.88
PDE1BQ01064 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1BQ01064 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE1BQ01064 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDE1BQ01064 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDE1BQ01064 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE1BQ01064 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1BQ01064 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE1BQ01064 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE1BQ01064 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDE1BQ01064 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDE1BQ01064 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 PGM5P4-201ENST00000421970 445 ntBASIC20.54■□□□□ 0.88
PDE1BQ01064 AC007322.1-201ENST00000426983 750 ntBASIC20.54■□□□□ 0.88
PDE1BQ01064 CNN2P6-201ENST00000439038 900 ntBASIC20.54■□□□□ 0.88
PDE1BQ01064 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.54■□□□□ 0.88
PDE1BQ01064 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE1BQ01064 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PDE1BQ01064 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE1BQ01064 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE1BQ01064 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDE1BQ01064 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1BQ01064 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.53■□□□□ 0.88
PDE1BQ01064 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.53■□□□□ 0.88
PDE1BQ01064 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDE1BQ01064 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1BQ01064 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDE1BQ01064 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1BQ01064 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1BQ01064 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE1BQ01064 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDE1BQ01064 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.53■□□□□ 0.88
PDE1BQ01064 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1BQ01064 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1BQ01064 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.53■□□□□ 0.88
PDE1BQ01064 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.53■□□□□ 0.88
PDE1BQ01064 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDE1BQ01064 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE1BQ01064 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms