Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDKL1Q00532 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.82■□□□□ 0.76
CDKL1Q00532 RARRES2P4-201ENST00000514074 484 ntBASIC19.82■□□□□ 0.76
CDKL1Q00532 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.82■□□□□ 0.76
CDKL1Q00532 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.82■□□□□ 0.76
CDKL1Q00532 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.82■□□□□ 0.76
CDKL1Q00532 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.82■□□□□ 0.76
CDKL1Q00532 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.82■□□□□ 0.76
CDKL1Q00532 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CDKL1Q00532 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDKL1Q00532 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.82■□□□□ 0.76
CDKL1Q00532 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL1Q00532 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.81■□□□□ 0.76
CDKL1Q00532 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.81■□□□□ 0.76
CDKL1Q00532 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL1Q00532 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.81■□□□□ 0.76
CDKL1Q00532 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDKL1Q00532 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.81■□□□□ 0.76
CDKL1Q00532 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL1Q00532 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDKL1Q00532 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDKL1Q00532 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDKL1Q00532 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDKL1Q00532 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL1Q00532 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL1Q00532 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CDKL1Q00532 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL1Q00532 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 AL512408.1-201ENST00000569378 2000 ntBASIC19.8■□□□□ 0.76
CDKL1Q00532 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CDKL1Q00532 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL1Q00532 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.8■□□□□ 0.76
CDKL1Q00532 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.8■□□□□ 0.76
CDKL1Q00532 AL356652.1-201ENST00000615962 565 ntBASIC19.8■□□□□ 0.76
CDKL1Q00532 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.8■□□□□ 0.76
CDKL1Q00532 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.8■□□□□ 0.76
CDKL1Q00532 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL1Q00532 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL1Q00532 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDKL1Q00532 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDKL1Q00532 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.79■□□□□ 0.76
CDKL1Q00532 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.79■□□□□ 0.76
CDKL1Q00532 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDKL1Q00532 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL1Q00532 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.79■□□□□ 0.76
CDKL1Q00532 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.78■□□□□ 0.76
CDKL1Q00532 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDKL1Q00532 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDKL1Q00532 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL1Q00532 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CDKL1Q00532 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDKL1Q00532 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 MCRIP2P1-201ENST00000394346 511 ntBASIC19.78■□□□□ 0.76
CDKL1Q00532 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 AC007322.1-201ENST00000426983 750 ntBASIC19.78■□□□□ 0.76
CDKL1Q00532 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.78■□□□□ 0.76
CDKL1Q00532 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms