Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL39P62891 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL39P62891 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL39P62891 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL39P62891 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL39P62891 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL39P62891 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RPL39P62891 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RPL39P62891 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RPL39P62891 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
RPL39P62891 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.23□□□□□ -0.13
RPL39P62891 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL39P62891 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.23□□□□□ -0.13
RPL39P62891 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL39P62891 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.23□□□□□ -0.13
RPL39P62891 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RPL39P62891 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL39P62891 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL39P62891 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RPL39P62891 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
RPL39P62891 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
RPL39P62891 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RPL39P62891 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 AL691432.2-201ENST00000607222 2038 ntBASIC14.22□□□□□ -0.13
RPL39P62891 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 AC093484.2-201ENST00000580996 2166 ntBASIC14.22□□□□□ -0.13
RPL39P62891 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL39P62891 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL39P62891 IGHV3-19-201ENST00000521488 291 ntBASIC14.22□□□□□ -0.13
RPL39P62891 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 EEF1DP3-203ENST00000566025 782 ntBASIC14.22□□□□□ -0.13
RPL39P62891 AC053503.5-201ENST00000601508 636 ntBASIC14.22□□□□□ -0.13
RPL39P62891 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 AC105233.4-201ENST00000642045 216 ntBASIC14.22□□□□□ -0.13
RPL39P62891 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RPL39P62891 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL39P62891 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
RPL39P62891 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RPL39P62891 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL39P62891 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RPL39P62891 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
RPL39P62891 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RPL39P62891 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.21□□□□□ -0.13
RPL39P62891 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms