Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM6P62312 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LSM6P62312 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.73■□□□□ 0.43
LSM6P62312 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM6P62312 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSM6P62312 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.72■□□□□ 0.43
LSM6P62312 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.72■□□□□ 0.43
LSM6P62312 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.72■□□□□ 0.43
LSM6P62312 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.72■□□□□ 0.43
LSM6P62312 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM6P62312 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM6P62312 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM6P62312 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSM6P62312 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM6P62312 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM6P62312 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LSM6P62312 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.71■□□□□ 0.43
LSM6P62312 AC004911.1-201ENST00000416316 871 ntBASIC17.71■□□□□ 0.43
LSM6P62312 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
LSM6P62312 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.71■□□□□ 0.43
LSM6P62312 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 AC133552.2-202ENST00000575694 574 ntBASIC17.71■□□□□ 0.43
LSM6P62312 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 AL137784.2-201ENST00000607332 1000 ntBASIC17.71■□□□□ 0.43
LSM6P62312 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM6P62312 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM6P62312 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 AC010980.2-201ENST00000587099 1412 ntBASIC17.71■□□□□ 0.43
LSM6P62312 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM6P62312 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
LSM6P62312 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LSM6P62312 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.71■□□□□ 0.42
LSM6P62312 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LSM6P62312 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LSM6P62312 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM6P62312 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM6P62312 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM6P62312 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM6P62312 IKBKGP1-201ENST00000612193 1073 ntBASIC17.7■□□□□ 0.42
LSM6P62312 AL589743.5-201ENST00000616611 1050 ntBASIC17.7■□□□□ 0.42
LSM6P62312 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM6P62312 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LSM6P62312 TCF3P1-201ENST00000423021 1937 ntBASIC17.7■□□□□ 0.42
LSM6P62312 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM6P62312 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM6P62312 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM6P62312 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM6P62312 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.69■□□□□ 0.42
LSM6P62312 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.69■□□□□ 0.42
LSM6P62312 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 AC073111.5-205ENST00000641717 521 ntBASIC17.69■□□□□ 0.42
LSM6P62312 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms