Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.83■□□□□ 0.6
RPS3AP61247 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.83■□□□□ 0.6
RPS3AP61247 AC010536.3-201ENST00000620306 533 ntBASIC18.83■□□□□ 0.6
RPS3AP61247 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
RPS3AP61247 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.83■□□□□ 0.6
RPS3AP61247 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RPS3AP61247 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.83■□□□□ 0.6
RPS3AP61247 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.83■□□□□ 0.6
RPS3AP61247 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS3AP61247 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RPS3AP61247 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.82■□□□□ 0.6
RPS3AP61247 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 AC061975.6-201ENST00000579045 1553 ntBASIC18.82■□□□□ 0.6
RPS3AP61247 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 CDCA4P2-201ENST00000441182 718 ntBASIC18.82■□□□□ 0.6
RPS3AP61247 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS3AP61247 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS3AP61247 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPS3AP61247 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS3AP61247 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 AC007322.1-201ENST00000426983 750 ntBASIC18.81■□□□□ 0.6
RPS3AP61247 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.81■□□□□ 0.6
RPS3AP61247 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS3AP61247 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPS3AP61247 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS3AP61247 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS3AP61247 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS3AP61247 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS3AP61247 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.8■□□□□ 0.6
RPS3AP61247 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS3AP61247 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS3AP61247 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 TERF1P5-201ENST00000477545 1207 ntBASIC18.8■□□□□ 0.6
RPS3AP61247 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 DUX4L16-201ENST00000555130 1264 ntBASIC18.8■□□□□ 0.6
RPS3AP61247 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS3AP61247 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS3AP61247 AC013268.1-206ENST00000638368 961 ntBASIC18.8■□□□□ 0.6
RPS3AP61247 AC112229.1-201ENST00000639295 961 ntBASIC18.8■□□□□ 0.6
RPS3AP61247 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.8■□□□□ 0.6
RPS3AP61247 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS3AP61247 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
RPS3AP61247 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms