Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN18P56856 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN18P56856 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN18P56856 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN18P56856 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN18P56856 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN18P56856 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN18P56856 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN18P56856 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN18P56856 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN18P56856 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN18P56856 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN18P56856 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN18P56856 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN18P56856 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN18P56856 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN18P56856 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN18P56856 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN18P56856 GCSHP5-201ENST00000443090 522 ntBASIC18.04■□□□□ 0.48
CLDN18P56856 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN18P56856 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN18P56856 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN18P56856 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN18P56856 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN18P56856 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN18P56856 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN18P56856 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLDN18P56856 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN18P56856 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN18P56856 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN18P56856 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN18P56856 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN18P56856 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN18P56856 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN18P56856 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN18P56856 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN18P56856 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN18P56856 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN18P56856 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN18P56856 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 RPS2P52-201ENST00000469610 820 ntBASIC18.02■□□□□ 0.48
CLDN18P56856 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN18P56856 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.02■□□□□ 0.48
CLDN18P56856 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN18P56856 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN18P56856 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN18P56856 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN18P56856 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN18P56856 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN18P56856 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CLDN18P56856 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN18P56856 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN18P56856 AC092720.2-201ENST00000602388 1665 ntBASIC18.02■□□□□ 0.47
CLDN18P56856 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN18P56856 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN18P56856 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN18P56856 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN18P56856 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN18P56856 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN18P56856 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN18P56856 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN18P56856 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN18P56856 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN18P56856 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN18P56856 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN18P56856 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN18P56856 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLDN18P56856 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN18P56856 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN18P56856 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CLDN18P56856 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN18P56856 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN18P56856 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLDN18P56856 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms