Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CMC4P56277 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CMC4P56277 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.04■□□□□ -0
CMC4P56277 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.04■□□□□ -0
CMC4P56277 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.04■□□□□ -0
CMC4P56277 MYC-209ENST00000641252 345 ntBASIC15.04■□□□□ -0
CMC4P56277 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CMC4P56277 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 BCL2-203ENST00000589955 5011 ntBASIC15.04■□□□□ -0
CMC4P56277 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CMC4P56277 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.03■□□□□ -0
CMC4P56277 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CMC4P56277 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CMC4P56277 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CMC4P56277 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.03■□□□□ -0
CMC4P56277 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.03■□□□□ -0
CMC4P56277 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.03■□□□□ -0
CMC4P56277 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.03■□□□□ -0
CMC4P56277 AC060766.5-201ENST00000590539 871 ntBASIC15.03■□□□□ -0
CMC4P56277 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.03■□□□□ -0
CMC4P56277 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CMC4P56277 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CMC4P56277 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.02■□□□□ -0
CMC4P56277 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.02■□□□□ -0
CMC4P56277 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CMC4P56277 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CMC4P56277 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.02■□□□□ -0
CMC4P56277 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.02■□□□□ -0
CMC4P56277 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.02■□□□□ -0
CMC4P56277 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.02■□□□□ -0
CMC4P56277 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.02■□□□□ -0
CMC4P56277 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.02■□□□□ -0
CMC4P56277 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CMC4P56277 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CMC4P56277 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CMC4P56277 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CMC4P56277 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CMC4P56277 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.02□□□□□ -0.01
CMC4P56277 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.02□□□□□ -0.01
CMC4P56277 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CMC4P56277 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 KRT8P20-201ENST00000423953 1409 ntBASIC15.01□□□□□ -0.01
CMC4P56277 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CMC4P56277 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CMC4P56277 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.01□□□□□ -0.01
CMC4P56277 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CMC4P56277 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CMC4P56277 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.01□□□□□ -0.01
CMC4P56277 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CMC4P56277 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CMC4P56277 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.01□□□□□ -0.01
CMC4P56277 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms