Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC125437.2-201ENST00000625180 2167 ntBASIC19.71■□□□□ 0.75
CDH13P55290 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH13P55290 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CDH13P55290 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDH13P55290 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH13P55290 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH13P55290 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH13P55290 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH13P55290 AL691432.2-201ENST00000607222 2038 ntBASIC19.69■□□□□ 0.74
CDH13P55290 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDH13P55290 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH13P55290 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH13P55290 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH13P55290 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CDH13P55290 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH13P55290 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH13P55290 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH13P55290 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH13P55290 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH13P55290 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDH13P55290 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.68■□□□□ 0.74
CDH13P55290 TERF1P5-201ENST00000477545 1207 ntBASIC19.68■□□□□ 0.74
CDH13P55290 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH13P55290 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH13P55290 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH13P55290 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH13P55290 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH13P55290 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH13P55290 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CDH13P55290 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH13P55290 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH13P55290 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH13P55290 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDH13P55290 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDH13P55290 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH13P55290 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH13P55290 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 AC034268.1-201ENST00000441047 882 ntBASIC19.67■□□□□ 0.74
CDH13P55290 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH13P55290 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH13P55290 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDH13P55290 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH13P55290 AC010536.3-201ENST00000620306 533 ntBASIC19.67■□□□□ 0.74
CDH13P55290 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms