Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDKN2DP55273 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 AL691432.2-201ENST00000607222 2038 ntBASIC19.94■□□□□ 0.78
CDKN2DP55273 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 AC004911.1-201ENST00000416316 871 ntBASIC19.94■□□□□ 0.78
CDKN2DP55273 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.94■□□□□ 0.78
CDKN2DP55273 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.94■□□□□ 0.78
CDKN2DP55273 AC007322.1-201ENST00000426983 750 ntBASIC19.94■□□□□ 0.78
CDKN2DP55273 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.94■□□□□ 0.78
CDKN2DP55273 AC231657.2-201ENST00000624556 255 ntBASIC19.94■□□□□ 0.78
CDKN2DP55273 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.94■□□□□ 0.78
CDKN2DP55273 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 BX119927.1-201ENST00000636596 1552 ntBASIC19.94■□□□□ 0.78
CDKN2DP55273 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.94■□□□□ 0.78
CDKN2DP55273 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKN2DP55273 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CDKN2DP55273 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.93■□□□□ 0.78
CDKN2DP55273 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKN2DP55273 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKN2DP55273 IKBKGP1-201ENST00000612193 1073 ntBASIC19.93■□□□□ 0.78
CDKN2DP55273 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKN2DP55273 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKN2DP55273 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDKN2DP55273 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKN2DP55273 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDKN2DP55273 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDKN2DP55273 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.92■□□□□ 0.78
CDKN2DP55273 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDKN2DP55273 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
CDKN2DP55273 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 AL355472.2-201ENST00000422958 438 ntBASIC19.92■□□□□ 0.78
CDKN2DP55273 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.92■□□□□ 0.78
CDKN2DP55273 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.92■□□□□ 0.78
CDKN2DP55273 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.92■□□□□ 0.78
CDKN2DP55273 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.92■□□□□ 0.78
CDKN2DP55273 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKN2DP55273 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.91■□□□□ 0.78
CDKN2DP55273 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDKN2DP55273 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.91■□□□□ 0.78
CDKN2DP55273 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKN2DP55273 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 AC069236.1-201ENST00000604339 616 ntBASIC19.91■□□□□ 0.78
CDKN2DP55273 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKN2DP55273 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.91■□□□□ 0.78
CDKN2DP55273 PTBP1P-201ENST00000554374 1601 ntBASIC19.91■□□□□ 0.78
CDKN2DP55273 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKN2DP55273 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKN2DP55273 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKN2DP55273 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 KRT18P68-201ENST00000392293 1000 ntBASIC19.9■□□□□ 0.78
CDKN2DP55273 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 CYP2T3P-201ENST00000601990 817 ntBASIC19.9■□□□□ 0.78
CDKN2DP55273 AC105020.6-201ENST00000621523 1217 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms