Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC4P55056 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC4P55056 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC4P55056 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.79□□□□□ -0.04
APOC4P55056 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOC4P55056 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOC4P55056 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC4P55056 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.79□□□□□ -0.04
APOC4P55056 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 AL158047.1-201ENST00000445918 881 ntBASIC14.79□□□□□ -0.04
APOC4P55056 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
APOC4P55056 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.79□□□□□ -0.04
APOC4P55056 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 LINC00565-201ENST00000562710 2331 ntBASIC14.79□□□□□ -0.04
APOC4P55056 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC4P55056 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 AC008403.3-201ENST00000598924 454 ntBASIC14.79□□□□□ -0.04
APOC4P55056 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
APOC4P55056 FAM197Y4-202ENST00000622692 608 ntBASIC14.79□□□□□ -0.04
APOC4P55056 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC4P55056 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
APOC4P55056 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC4P55056 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
APOC4P55056 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOC4P55056 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
APOC4P55056 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC4P55056 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
APOC4P55056 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC4P55056 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APOC4P55056 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC4P55056 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APOC4P55056 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC4P55056 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC4P55056 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC4P55056 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC4P55056 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
APOC4P55056 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APOC4P55056 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
APOC4P55056 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC4P55056 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
APOC4P55056 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC4P55056 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC4P55056 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
APOC4P55056 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
APOC4P55056 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC4P55056 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC4P55056 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.77□□□□□ -0.05
APOC4P55056 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.77□□□□□ -0.05
APOC4P55056 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.77□□□□□ -0.05
APOC4P55056 AC069544.1-201ENST00000609399 999 ntBASIC14.77□□□□□ -0.05
APOC4P55056 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC4P55056 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms