Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PMS2P54278 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.78■□□□□ 0.92
PMS2P54278 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.78■□□□□ 0.92
PMS2P54278 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PMS2P54278 MIR6084-201ENST00000622012 110 ntBASIC20.78■□□□□ 0.92
PMS2P54278 AC092437.1-201ENST00000624794 1048 ntBASIC20.78■□□□□ 0.92
PMS2P54278 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.78■□□□□ 0.92
PMS2P54278 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.78■□□□□ 0.92
PMS2P54278 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PMS2P54278 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.77■□□□□ 0.92
PMS2P54278 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.77■□□□□ 0.92
PMS2P54278 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.77■□□□□ 0.92
PMS2P54278 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
PMS2P54278 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.77■□□□□ 0.92
PMS2P54278 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PMS2P54278 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS2P54278 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.77■□□□□ 0.91
PMS2P54278 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PMS2P54278 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PMS2P54278 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PMS2P54278 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PMS2P54278 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PMS2P54278 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.76■□□□□ 0.91
PMS2P54278 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.76■□□□□ 0.91
PMS2P54278 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.76■□□□□ 0.91
PMS2P54278 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.76■□□□□ 0.91
PMS2P54278 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS2P54278 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.75■□□□□ 0.91
PMS2P54278 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PMS2P54278 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.75■□□□□ 0.91
PMS2P54278 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
PMS2P54278 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS2P54278 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.75■□□□□ 0.91
PMS2P54278 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.75■□□□□ 0.91
PMS2P54278 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS2P54278 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.75■□□□□ 0.91
PMS2P54278 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PMS2P54278 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PMS2P54278 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PMS2P54278 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.75■□□□□ 0.91
PMS2P54278 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.75■□□□□ 0.91
PMS2P54278 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PMS2P54278 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS2P54278 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.75■□□□□ 0.91
PMS2P54278 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.75■□□□□ 0.91
PMS2P54278 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
PMS2P54278 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PMS2P54278 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.74■□□□□ 0.91
PMS2P54278 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.74■□□□□ 0.91
PMS2P54278 TNXA-203ENST00000507684 2038 ntBASIC20.74■□□□□ 0.91
PMS2P54278 CCDC92B-201ENST00000575506 885 ntBASIC20.74■□□□□ 0.91
PMS2P54278 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.74■□□□□ 0.91
PMS2P54278 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
PMS2P54278 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PMS2P54278 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS2P54278 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.74■□□□□ 0.91
PMS2P54278 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PMS2P54278 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS2P54278 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PMS2P54278 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.73■□□□□ 0.91
PMS2P54278 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PMS2P54278 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PMS2P54278 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PMS2P54278 TMEM179-206ENST00000616017 1645 ntBASIC20.73■□□□□ 0.91
PMS2P54278 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PMS2P54278 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms