Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
LIMK1P53667 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
LIMK1P53667 UNC93B2-201ENST00000285383 730 ntBASIC19.98■□□□□ 0.79
LIMK1P53667 TERF1P1-201ENST00000311003 1181 ntBASIC19.98■□□□□ 0.79
LIMK1P53667 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK1P53667 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK1P53667 KRT18P57-201ENST00000443599 1254 ntBASIC19.98■□□□□ 0.79
LIMK1P53667 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.98■□□□□ 0.79
LIMK1P53667 KRT16P5-201ENST00000455284 522 ntBASIC19.98■□□□□ 0.79
LIMK1P53667 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.98■□□□□ 0.79
LIMK1P53667 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK1P53667 AC087633.2-202ENST00000565166 1439 ntBASIC19.98■□□□□ 0.79
LIMK1P53667 AC073508.3-201ENST00000619697 1419 ntBASIC19.98■□□□□ 0.79
LIMK1P53667 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
LIMK1P53667 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LIMK1P53667 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.98■□□□□ 0.79
LIMK1P53667 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK1P53667 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK1P53667 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.98■□□□□ 0.79
LIMK1P53667 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK1P53667 AC073130.3-201ENST00000624389 2278 ntBASIC19.97■□□□□ 0.79
LIMK1P53667 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.97■□□□□ 0.79
LIMK1P53667 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LIMK1P53667 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LIMK1P53667 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LIMK1P53667 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK1P53667 AL137013.1-201ENST00000432946 1228 ntBASIC19.97■□□□□ 0.79
LIMK1P53667 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK1P53667 NTF6B-201ENST00000591913 560 ntBASIC19.97■□□□□ 0.79
LIMK1P53667 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.97■□□□□ 0.79
LIMK1P53667 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK1P53667 KRT18P22-201ENST00000402024 1347 ntBASIC19.97■□□□□ 0.79
LIMK1P53667 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK1P53667 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LIMK1P53667 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LIMK1P53667 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LIMK1P53667 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LIMK1P53667 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LIMK1P53667 DUX4L26-201ENST00000489078 1255 ntBASIC19.96■□□□□ 0.79
LIMK1P53667 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LIMK1P53667 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.96■□□□□ 0.79
LIMK1P53667 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.96■□□□□ 0.79
LIMK1P53667 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.96■□□□□ 0.79
LIMK1P53667 AC073195.1-201ENST00000607241 877 ntBASIC19.96■□□□□ 0.79
LIMK1P53667 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.96■□□□□ 0.79
LIMK1P53667 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.96■□□□□ 0.79
LIMK1P53667 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LIMK1P53667 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.96■□□□□ 0.79
LIMK1P53667 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LIMK1P53667 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK1P53667 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LIMK1P53667 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 KRT8P9-201ENST00000558927 1449 ntBASIC19.95■□□□□ 0.78
LIMK1P53667 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 FAM197Y1-201ENST00000421178 764 ntBASIC19.95■□□□□ 0.78
LIMK1P53667 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.95■□□□□ 0.78
LIMK1P53667 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.95■□□□□ 0.78
LIMK1P53667 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK1P53667 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK1P53667 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK1P53667 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LIMK1P53667 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
LIMK1P53667 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK1P53667 AC079598.2-202ENST00000546624 1451 ntBASIC19.94■□□□□ 0.78
LIMK1P53667 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.94■□□□□ 0.78
LIMK1P53667 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms