Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 snR51snR51 107 nt2.14□□□□□ -2.07
SLD3P53135 USO1YDL058W 5373 nt2.14□□□□□ -2.07
SLD3P53135 YGR250CYGR250C 2346 nt2.13□□□□□ -2.07
SLD3P53135 HTL1YCR020W-B 237 nt2.13□□□□□ -2.07
SLD3P53135 NPC2YDL046W 522 nt2.13□□□□□ -2.07
SLD3P53135 ATG9YDL149W 2994 nt2.13□□□□□ -2.07
SLD3P53135 YDR003W-AYDR003W-A 123 nt2.13□□□□□ -2.07
SLD3P53135 YEL057CYEL057C 702 nt2.13□□□□□ -2.07
SLD3P53135 PCC1YKR095W-A 267 nt2.13□□□□□ -2.07
SLD3P53135 HER1YOR227W 3741 nt2.13□□□□□ -2.07
SLD3P53135 MCD1YDL003W 1701 nt2.13□□□□□ -2.07
SLD3P53135 SLY1YDR189W 2001 nt2.13□□□□□ -2.07
SLD3P53135 NOP14YDL148C 2433 nt2.12□□□□□ -2.07
SLD3P53135 COS111YBR203W 2775 nt2.12□□□□□ -2.07
SLD3P53135 YDL118WYDL118W 381 nt2.12□□□□□ -2.07
SLD3P53135 YDR048CYDR048C 315 nt2.12□□□□□ -2.07
SLD3P53135 TRX1YLR043C 312 nt2.12□□□□□ -2.07
SLD3P53135 YLR255CYLR255C 354 nt2.12□□□□□ -2.07
SLD3P53135 MF(ALPHA)1YPL187W 498 nt2.12□□□□□ -2.07
SLD3P53135 MSH5YDL154W 2706 nt2.11□□□□□ -2.07
SLD3P53135 NUP170YBL079W 4509 nt2.11□□□□□ -2.07
SLD3P53135 YPR002C-AYPR002C-A 198 nt2.11□□□□□ -2.07
SLD3P53135 CTR9YOL145C 3234 nt2.11□□□□□ -2.07
SLD3P53135 CFT2YLR115W 2580 nt2.1□□□□□ -2.07
SLD3P53135 MAK10YEL053C 2202 nt2.1□□□□□ -2.07
SLD3P53135 HCS1YKL017C 2052 nt2.1□□□□□ -2.07
SLD3P53135 INP2YMR163C 2118 nt2.1□□□□□ -2.07
SLD3P53135 RGA1YOR127W 3024 nt2.1□□□□□ -2.07
SLD3P53135 HIR3YJR140C 4947 nt2.09□□□□□ -2.07
SLD3P53135 PDR8YLR266C 2106 nt2.09□□□□□ -2.07
SLD3P53135 ZIP1YDR285W 2628 nt2.09□□□□□ -2.07
SLD3P53135 UFD4YKL010C 4452 nt2.09□□□□□ -2.07
SLD3P53135 RLM1YPL089C 2031 nt2.09□□□□□ -2.07
SLD3P53135 SPP41YDR464W 4308 nt2.09□□□□□ -2.07
SLD3P53135 YDR426CYDR426C 378 nt2.09□□□□□ -2.07
SLD3P53135 YHR071C-AYHR071C-A 321 nt2.09□□□□□ -2.07
SLD3P53135 YJL052C-AYJL052C-A 120 nt2.09□□□□□ -2.07
SLD3P53135 YAR029WYAR029W 225 nt2.09□□□□□ -2.07
SLD3P53135 DGR1YNL130C-A 147 nt2.09□□□□□ -2.07
SLD3P53135 YFR016CYFR016C 3702 nt2.09□□□□□ -2.08
SLD3P53135 YLL032CYLL032C 2478 nt2.09□□□□□ -2.08
SLD3P53135 YGL149WYGL149W 306 nt2.08□□□□□ -2.08
SLD3P53135 YMR290W-AYMR290W-A 348 nt2.08□□□□□ -2.08
SLD3P53135 YPR010C-AYPR010C-A 219 nt2.08□□□□□ -2.08
SLD3P53135 DCP2YNL118C 2913 nt2.08□□□□□ -2.08
SLD3P53135 KOG1YHR186C 4674 nt2.08□□□□□ -2.08
SLD3P53135 HSH155YMR288W 2916 nt2.07□□□□□ -2.08
SLD3P53135 UBP2YOR124C 3819 nt2.07□□□□□ -2.08
SLD3P53135 SEY1YOR165W 2331 nt2.07□□□□□ -2.08
SLD3P53135 VTC1YER072W 390 nt2.07□□□□□ -2.08
SLD3P53135 RPB10YOR210W 213 nt2.07□□□□□ -2.08
SLD3P53135 SEC63YOR254C 1992 nt2.07□□□□□ -2.08
SLD3P53135 IRE1YHR079C 3348 nt2.06□□□□□ -2.08
SLD3P53135 ATG11YPR049C 3537 nt2.06□□□□□ -2.08
SLD3P53135 snR72snR72 98 nt2.05□□□□□ -2.08
SLD3P53135 YIL102CYIL102C 306 nt2.05□□□□□ -2.08
SLD3P53135 ENV11YGR071C 2583 nt2.05□□□□□ -2.08
SLD3P53135 DBP6YNR038W 1890 nt2.05□□□□□ -2.08
SLD3P53135 AGC1YPR021C 2709 nt2.04□□□□□ -2.08
SLD3P53135 BRE1YDL074C 2103 nt2.04□□□□□ -2.08
SLD3P53135 MGA2YIR033W 3342 nt2.04□□□□□ -2.08
SLD3P53135 SLN1YIL147C 3663 nt2.04□□□□□ -2.08
SLD3P53135 HMI1YOL095C 2121 nt2.03□□□□□ -2.08
SLD3P53135 YJL135WYJL135W 318 nt2.03□□□□□ -2.08
SLD3P53135 YPR063CYPR063C 423 nt2.03□□□□□ -2.08
SLD3P53135 MLH3YPL164C 2148 nt2.03□□□□□ -2.08
SLD3P53135 SAP190YKR028W 3102 nt2.02□□□□□ -2.09
SLD3P53135 MSH6YDR097C 3729 nt2.02□□□□□ -2.09
SLD3P53135 SRP14YDL092W 441 nt2.01□□□□□ -2.09
SLD3P53135 SAS3YBL052C 2496 nt2□□□□□ -2.09
SLD3P53135 NIP100YPL174C 2607 nt2□□□□□ -2.09
SLD3P53135 APL2YKL135C 2181 nt2□□□□□ -2.09
SLD3P53135 MYO4YAL029C 4416 nt2□□□□□ -2.09
SLD3P53135 TBS1YBR150C 3285 nt1.99□□□□□ -2.09
SLD3P53135 MDM20YOL076W 2391 nt1.99□□□□□ -2.09
SLD3P53135 DGR2YKL121W 2559 nt1.99□□□□□ -2.09
SLD3P53135 YDR344CYDR344C 444 nt1.99□□□□□ -2.09
SLD3P53135 YIL032CYIL032C 357 nt1.99□□□□□ -2.09
SLD3P53135 YOL160WYOL160W 342 nt1.99□□□□□ -2.09
SLD3P53135 YJR039WYJR039W 3366 nt1.99□□□□□ -2.09
SLD3P53135 PIG1YLR273C 1947 nt1.99□□□□□ -2.09
SLD3P53135 FRK1YPL141C 2598 nt1.99□□□□□ -2.09
SLD3P53135 ELG1YOR144C 2376 nt1.98□□□□□ -2.09
SLD3P53135 UTP22YGR090W 3714 nt1.97□□□□□ -2.09
SLD3P53135 GCN2YDR283C 4980 nt1.97□□□□□ -2.09
SLD3P53135 YDR182W-AYDR182W-A 204 nt1.97□□□□□ -2.09
SLD3P53135 YHL042WYHL042W 453 nt1.97□□□□□ -2.09
SLD3P53135 YMR242W-AYMR242W-A 90 nt1.97□□□□□ -2.09
SLD3P53135 OST1YJL002C 1431 nt1.97□□□□□ -2.09
SLD3P53135 UBR2YLR024C 5619 nt1.96□□□□□ -2.1
SLD3P53135 INO80YGL150C 4470 nt1.96□□□□□ -2.1
SLD3P53135 YCR022CYCR022C 345 nt1.96□□□□□ -2.1
SLD3P53135 SPC98YNL126W 2541 nt1.96□□□□□ -2.1
SLD3P53135 SEC31YDL195W 3822 nt1.96□□□□□ -2.1
SLD3P53135 ZIP2YGL249W 2115 nt1.96□□□□□ -2.1
SLD3P53135 YNL144CYNL144C 2223 nt1.95□□□□□ -2.1
SLD3P53135 ALG13YGL047W 609 nt1.95□□□□□ -2.1
SLD3P53135 TMA7YLR262C-A 195 nt1.95□□□□□ -2.1
SLD3P53135 YOR108C-AYOR108C-A 210 nt1.95□□□□□ -2.1
SLD3P53135 REV3YPL167C 4515 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 27.2 ms