Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 GIS1YDR096W 2685 nt3.54□□□□□ -1.84
RTF1P53064 tW(CCA)G1tW(CCA)G1 72 nt3.54□□□□□ -1.84
RTF1P53064 tW(CCA)G2tW(CCA)G2 72 nt3.54□□□□□ -1.84
RTF1P53064 tW(CCA)JtW(CCA)J 72 nt3.54□□□□□ -1.84
RTF1P53064 tW(CCA)KtW(CCA)K 72 nt3.54□□□□□ -1.84
RTF1P53064 tW(CCA)MtW(CCA)M 72 nt3.54□□□□□ -1.84
RTF1P53064 tW(CCA)PtW(CCA)P 72 nt3.54□□□□□ -1.84
RTF1P53064 RPS25BYLR333C 327 nt3.54□□□□□ -1.84
RTF1P53064 YPL150WYPL150W 2706 nt3.54□□□□□ -1.84
RTF1P53064 APL5YPL195W 2799 nt3.53□□□□□ -1.84
RTF1P53064 OST4YDL232W 111 nt3.53□□□□□ -1.84
RTF1P53064 YBR277CYBR277C 402 nt3.53□□□□□ -1.84
RTF1P53064 YPR089WYPR089W 2667 nt3.53□□□□□ -1.84
RTF1P53064 SNQ2YDR011W 4506 nt3.52□□□□□ -1.85
RTF1P53064 PAU3YCR104W 375 nt3.52□□□□□ -1.85
RTF1P53064 YHR073W-AYHR073W-A 177 nt3.52□□□□□ -1.85
RTF1P53064 ATP7YKL016C 525 nt3.52□□□□□ -1.85
RTF1P53064 RPN1YHR027C 2982 nt3.52□□□□□ -1.85
RTF1P53064 HRD3YLR207W 2502 nt3.51□□□□□ -1.85
RTF1P53064 tL(UAA)QtL(UAA)Q 85 nt3.51□□□□□ -1.85
RTF1P53064 CMC4YMR194C-B 222 nt3.51□□□□□ -1.85
RTF1P53064 RPL20AYMR242C 519 nt3.51□□□□□ -1.85
RTF1P53064 CDC31YOR257W 486 nt3.51□□□□□ -1.85
RTF1P53064 MNE1YOR350C 1992 nt3.51□□□□□ -1.85
RTF1P53064 PDR3YBL005W 2931 nt3.5□□□□□ -1.85
RTF1P53064 AIM44YPL158C 2277 nt3.5□□□□□ -1.85
RTF1P53064 DNL4YOR005C 2835 nt3.5□□□□□ -1.85
RTF1P53064 YBT1YLL048C 4986 nt3.5□□□□□ -1.85
RTF1P53064 YCR043CYCR043C 384 nt3.5□□□□□ -1.85
RTF1P53064 YHR032W-AYHR032W-A 180 nt3.5□□□□□ -1.85
RTF1P53064 PHD1YKL043W 1101 nt3.5□□□□□ -1.85
RTF1P53064 RCY1YJL204C 2523 nt3.5□□□□□ -1.85
RTF1P53064 PSK1YAL017W 4071 nt3.49□□□□□ -1.85
RTF1P53064 TAO3YIL129C 7131 nt3.49□□□□□ -1.85
RTF1P53064 FMP16YDR070C 282 nt3.49□□□□□ -1.85
RTF1P53064 YIL174WYIL174W 228 nt3.49□□□□□ -1.85
RTF1P53064 YJL222W-AYJL222W-A 228 nt3.49□□□□□ -1.85
RTF1P53064 RRM3YHR031C 2172 nt3.49□□□□□ -1.85
RTF1P53064 UBP14YBR058C 2346 nt3.49□□□□□ -1.85
RTF1P53064 CTF4YPR135W 2784 nt3.49□□□□□ -1.85
RTF1P53064 YDR239CYDR239C 2364 nt3.48□□□□□ -1.85
RTF1P53064 RIC1YLR039C 3171 nt3.48□□□□□ -1.85
RTF1P53064 SWI5YDR146C 2130 nt3.48□□□□□ -1.85
RTF1P53064 EMP24YGL200C 612 nt3.48□□□□□ -1.85
RTF1P53064 YLL066W-BYLL066W-B 171 nt3.48□□□□□ -1.85
RTF1P53064 YKU80YMR106C 1890 nt3.47□□□□□ -1.85
RTF1P53064 PTP3YER075C 2787 nt3.47□□□□□ -1.85
RTF1P53064 NOC3YLR002C 1992 nt3.47□□□□□ -1.85
RTF1P53064 PRP6YBR055C 2700 nt3.47□□□□□ -1.85
RTF1P53064 YCL046WYCL046W 324 nt3.47□□□□□ -1.85
RTF1P53064 FKS3YMR306W 5358 nt3.47□□□□□ -1.85
RTF1P53064 SUL1YBR294W 2580 nt3.47□□□□□ -1.85
RTF1P53064 YBR206WYBR206W 324 nt3.46□□□□□ -1.86
RTF1P53064 INP52YNL106C 3552 nt3.46□□□□□ -1.86
RTF1P53064 PBY1YBR094W 2262 nt3.46□□□□□ -1.86
RTF1P53064 RTT10YPL183C 3042 nt3.46□□□□□ -1.86
RTF1P53064 TAF2YCR042C 4224 nt3.46□□□□□ -1.86
RTF1P53064 UTP14YML093W 2700 nt3.45□□□□□ -1.86
RTF1P53064 BCK1YJL095W 4437 nt3.45□□□□□ -1.86
RTF1P53064 SCH9YHR205W 2475 nt3.45□□□□□ -1.86
RTF1P53064 NET1YJL076W 3570 nt3.45□□□□□ -1.86
RTF1P53064 NEW1YPL226W 3591 nt3.45□□□□□ -1.86
RTF1P53064 LYS14YDR034C 2373 nt3.44□□□□□ -1.86
RTF1P53064 TAE2YPL009C 3117 nt3.44□□□□□ -1.86
RTF1P53064 SMY2YBR172C 2223 nt3.44□□□□□ -1.86
RTF1P53064 STB4YMR019W 2850 nt3.43□□□□□ -1.86
RTF1P53064 SLN1YIL147C 3663 nt3.43□□□□□ -1.86
RTF1P53064 TFC4YGR047C 3078 nt3.42□□□□□ -1.86
RTF1P53064 IKI3YLR384C 4050 nt3.42□□□□□ -1.86
RTF1P53064 PUT3YKL015W 2940 nt3.42□□□□□ -1.86
RTF1P53064 DSE4YNR067C 3354 nt3.42□□□□□ -1.86
RTF1P53064 KAP123YER110C 3342 nt3.42□□□□□ -1.86
RTF1P53064 MNL2YLR057W 2550 nt3.42□□□□□ -1.86
RTF1P53064 YDR098C-BYDR098C-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YDR210C-DYDR210C-D 5268 nt3.41□□□□□ -1.86
RTF1P53064 YDR316W-BYDR316W-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YDR365W-BYDR365W-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YER138CYER138C 5268 nt3.41□□□□□ -1.86
RTF1P53064 YER160CYER160C 5268 nt3.41□□□□□ -1.86
RTF1P53064 YGR038C-BYGR038C-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YGR161C-DYGR161C-D 5268 nt3.41□□□□□ -1.86
RTF1P53064 YJR027WYJR027W 5268 nt3.41□□□□□ -1.86
RTF1P53064 YLR157C-BYLR157C-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YML039WYML039W 5268 nt3.41□□□□□ -1.86
RTF1P53064 YML045WYML045W 5268 nt3.41□□□□□ -1.86
RTF1P53064 YMR050CYMR050C 5268 nt3.41□□□□□ -1.86
RTF1P53064 YOL103W-BYOL103W-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YBR012W-BYBR012W-B 5271 nt3.41□□□□□ -1.86
RTF1P53064 YOR142W-BYOR142W-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YPL257W-BYPL257W-B 5268 nt3.41□□□□□ -1.86
RTF1P53064 YPR158W-BYPR158W-B 5271 nt3.41□□□□□ -1.86
RTF1P53064 SOM1YEL059C-A 225 nt3.41□□□□□ -1.86
RTF1P53064 tS(GCU)Q1tS(GCU)Q1 86 nt3.41□□□□□ -1.86
RTF1P53064 YIL134C-AYIL134C-A 204 nt3.41□□□□□ -1.86
RTF1P53064 snR45snR45 172 nt3.41□□□□□ -1.86
RTF1P53064 PIP2YOR363C 2991 nt3.4□□□□□ -1.86
RTF1P53064 FRE2YKL220C 2136 nt3.4□□□□□ -1.86
RTF1P53064 SGS1YMR190C 4344 nt3.4□□□□□ -1.86
RTF1P53064 RPO41YFL036W 4056 nt3.4□□□□□ -1.87
RTF1P53064 SPO22YIL073C 2928 nt3.4□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms