Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCR9P51686 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCR9P51686 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.72■□□□□ 0.43
CCR9P51686 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.72■□□□□ 0.43
CCR9P51686 SLC7A5P1-201ENST00000568957 537 ntBASIC17.72■□□□□ 0.43
CCR9P51686 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
CCR9P51686 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.72■□□□□ 0.43
CCR9P51686 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCR9P51686 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.72■□□□□ 0.43
CCR9P51686 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCR9P51686 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.71■□□□□ 0.43
CCR9P51686 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.71■□□□□ 0.43
CCR9P51686 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCR9P51686 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.71■□□□□ 0.43
CCR9P51686 AC007322.3-201ENST00000426526 701 ntBASIC17.71■□□□□ 0.43
CCR9P51686 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.71■□□□□ 0.43
CCR9P51686 FAM21FP-204ENST00000608637 956 ntBASIC17.71■□□□□ 0.43
CCR9P51686 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.71■□□□□ 0.43
CCR9P51686 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.71■□□□□ 0.43
CCR9P51686 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.71■□□□□ 0.43
CCR9P51686 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
CCR9P51686 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCR9P51686 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCR9P51686 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCR9P51686 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCR9P51686 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCR9P51686 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCR9P51686 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
CCR9P51686 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.7■□□□□ 0.42
CCR9P51686 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCR9P51686 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.7■□□□□ 0.42
CCR9P51686 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
CCR9P51686 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.7■□□□□ 0.42
CCR9P51686 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.7■□□□□ 0.42
CCR9P51686 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCR9P51686 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CCR9P51686 RBM17P2-201ENST00000616397 1405 ntBASIC17.7■□□□□ 0.42
CCR9P51686 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.7■□□□□ 0.42
CCR9P51686 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCR9P51686 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCR9P51686 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCR9P51686 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.7■□□□□ 0.42
CCR9P51686 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
CCR9P51686 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.69■□□□□ 0.42
CCR9P51686 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCR9P51686 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.69■□□□□ 0.42
CCR9P51686 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCR9P51686 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.69■□□□□ 0.42
CCR9P51686 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.69■□□□□ 0.42
CCR9P51686 AC125437.2-201ENST00000625180 2167 ntBASIC17.69■□□□□ 0.42
CCR9P51686 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCR9P51686 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCR9P51686 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCR9P51686 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms