Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6CP51160 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6CP51160 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.76■■□□□ 1.07
PDE6CP51160 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PDE6CP51160 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6CP51160 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE6CP51160 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE6CP51160 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6CP51160 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE6CP51160 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.76■■□□□ 1.07
PDE6CP51160 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE6CP51160 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.75■■□□□ 1.07
PDE6CP51160 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PDE6CP51160 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDE6CP51160 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PDE6CP51160 AC093787.1-201ENST00000450396 207 ntBASIC21.75■■□□□ 1.07
PDE6CP51160 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.75■■□□□ 1.07
PDE6CP51160 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDE6CP51160 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.75■■□□□ 1.07
PDE6CP51160 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE6CP51160 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE6CP51160 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.74■■□□□ 1.07
PDE6CP51160 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 KRT8P36-201ENST00000489121 1440 ntBASIC21.74■■□□□ 1.07
PDE6CP51160 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PDE6CP51160 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PDE6CP51160 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6CP51160 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.74■■□□□ 1.07
PDE6CP51160 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.74■■□□□ 1.07
PDE6CP51160 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
PDE6CP51160 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PDE6CP51160 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.74■■□□□ 1.07
PDE6CP51160 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE6CP51160 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.74■■□□□ 1.07
PDE6CP51160 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE6CP51160 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PDE6CP51160 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PDE6CP51160 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 PGM5P4-201ENST00000421970 445 ntBASIC21.73■■□□□ 1.07
PDE6CP51160 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.73■■□□□ 1.07
PDE6CP51160 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.73■■□□□ 1.07
PDE6CP51160 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PDE6CP51160 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.73■■□□□ 1.07
PDE6CP51160 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.73■■□□□ 1.07
PDE6CP51160 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE6CP51160 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE6CP51160 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
PDE6CP51160 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 AL162377.1-201ENST00000618844 1793 ntBASIC21.72■■□□□ 1.07
PDE6CP51160 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE6CP51160 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE6CP51160 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 BX276092.2-201ENST00000417668 665 ntBASIC21.72■■□□□ 1.07
PDE6CP51160 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.72■■□□□ 1.07
PDE6CP51160 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.72■■□□□ 1.07
PDE6CP51160 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PDE6CP51160 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE6CP51160 AC010980.2-201ENST00000587099 1412 ntBASIC21.72■■□□□ 1.07
PDE6CP51160 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE6CP51160 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms