Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPT1AP50416 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPT1AP50416 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
CPT1AP50416 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPT1AP50416 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPT1AP50416 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPT1AP50416 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.47■■□□□ 1.19
CPT1AP50416 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPT1AP50416 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CPT1AP50416 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPT1AP50416 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.47■■□□□ 1.19
CPT1AP50416 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CPT1AP50416 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.47■■□□□ 1.19
CPT1AP50416 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.47■■□□□ 1.19
CPT1AP50416 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.47■■□□□ 1.19
CPT1AP50416 AC010331.1-201ENST00000611423 582 ntBASIC22.47■■□□□ 1.19
CPT1AP50416 AC121338.2-201ENST00000622535 1744 ntBASIC22.47■■□□□ 1.19
CPT1AP50416 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
CPT1AP50416 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPT1AP50416 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.46■■□□□ 1.19
CPT1AP50416 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.46■■□□□ 1.19
CPT1AP50416 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.46■■□□□ 1.19
CPT1AP50416 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CPT1AP50416 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.46■■□□□ 1.19
CPT1AP50416 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.46■■□□□ 1.19
CPT1AP50416 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.46■■□□□ 1.19
CPT1AP50416 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.46■■□□□ 1.19
CPT1AP50416 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
CPT1AP50416 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.46■■□□□ 1.19
CPT1AP50416 AC012306.2-201ENST00000609350 630 ntBASIC22.46■■□□□ 1.19
CPT1AP50416 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CPT1AP50416 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.46■■□□□ 1.19
CPT1AP50416 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.46■■□□□ 1.19
CPT1AP50416 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPT1AP50416 AL049796.1-201ENST00000565336 1766 ntBASIC22.45■■□□□ 1.19
CPT1AP50416 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
CPT1AP50416 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.45■■□□□ 1.18
CPT1AP50416 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPT1AP50416 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPT1AP50416 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPT1AP50416 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.45■■□□□ 1.18
CPT1AP50416 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPT1AP50416 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CPT1AP50416 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CPT1AP50416 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.45■■□□□ 1.18
CPT1AP50416 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.45■■□□□ 1.18
CPT1AP50416 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.45■■□□□ 1.18
CPT1AP50416 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPT1AP50416 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.45■■□□□ 1.18
CPT1AP50416 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CPT1AP50416 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPT1AP50416 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPT1AP50416 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPT1AP50416 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CPT1AP50416 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CPT1AP50416 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPT1AP50416 FBXW4P1-201ENST00000426721 2239 ntBASIC22.44■■□□□ 1.18
CPT1AP50416 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPT1AP50416 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.44■■□□□ 1.18
CPT1AP50416 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPT1AP50416 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.44■■□□□ 1.18
CPT1AP50416 AC073195.1-201ENST00000607241 877 ntBASIC22.44■■□□□ 1.18
CPT1AP50416 AL117328.2-201ENST00000624617 1940 ntBASIC22.44■■□□□ 1.18
CPT1AP50416 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.43■■□□□ 1.18
CPT1AP50416 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.43■■□□□ 1.18
CPT1AP50416 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 FAM197Y1-201ENST00000421178 764 ntBASIC22.43■■□□□ 1.18
CPT1AP50416 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
CPT1AP50416 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.43■■□□□ 1.18
CPT1AP50416 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.43■■□□□ 1.18
CPT1AP50416 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
CPT1AP50416 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPT1AP50416 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPT1AP50416 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.42■■□□□ 1.18
CPT1AP50416 AL024507.2-201ENST00000606070 2574 ntBASIC22.42■■□□□ 1.18
CPT1AP50416 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPT1AP50416 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPT1AP50416 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CPT1AP50416 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.42■■□□□ 1.18
CPT1AP50416 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CPT1AP50416 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.42■■□□□ 1.18
CPT1AP50416 AL353708.3-201ENST00000610272 989 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms