Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLK3P49761 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 AC099778.1-201ENST00000568593 1911 ntBASIC19.06■□□□□ 0.64
CLK3P49761 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLK3P49761 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.05■□□□□ 0.64
CLK3P49761 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK3P49761 TERF1P5-201ENST00000477545 1207 ntBASIC19.05■□□□□ 0.64
CLK3P49761 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK3P49761 AC011767.1-201ENST00000617410 1153 ntBASIC19.05■□□□□ 0.64
CLK3P49761 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.05■□□□□ 0.64
CLK3P49761 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK3P49761 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.05■□□□□ 0.64
CLK3P49761 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLK3P49761 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLK3P49761 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLK3P49761 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CLK3P49761 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.04■□□□□ 0.64
CLK3P49761 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.04■□□□□ 0.64
CLK3P49761 RBM17P2-201ENST00000616397 1405 ntBASIC19.04■□□□□ 0.64
CLK3P49761 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLK3P49761 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK3P49761 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK3P49761 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.03■□□□□ 0.64
CLK3P49761 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.03■□□□□ 0.64
CLK3P49761 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
CLK3P49761 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.03■□□□□ 0.64
CLK3P49761 AC013268.1-206ENST00000638368 961 ntBASIC19.03■□□□□ 0.64
CLK3P49761 AC112229.1-201ENST00000639295 961 ntBASIC19.03■□□□□ 0.64
CLK3P49761 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLK3P49761 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLK3P49761 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLK3P49761 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
CLK3P49761 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLK3P49761 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLK3P49761 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CLK3P49761 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLK3P49761 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLK3P49761 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLK3P49761 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLK3P49761 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CLK3P49761 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CLK3P49761 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.02■□□□□ 0.64
CLK3P49761 CDV3P1-201ENST00000471403 739 ntBASIC19.02■□□□□ 0.64
CLK3P49761 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.02■□□□□ 0.64
CLK3P49761 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.02■□□□□ 0.64
CLK3P49761 AC092666.2-201ENST00000613287 246 ntBASIC19.02■□□□□ 0.64
CLK3P49761 RARRES2P11-201ENST00000635158 484 ntBASIC19.02■□□□□ 0.64
CLK3P49761 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
CLK3P49761 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLK3P49761 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.02■□□□□ 0.64
CLK3P49761 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CLK3P49761 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms