Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A6P48664 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A6P48664 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A6P48664 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SLC1A6P48664 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A6P48664 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC1A6P48664 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SLC1A6P48664 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC1A6P48664 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 AC010141.2-201ENST00000452426 721 ntBASIC19.81■□□□□ 0.76
SLC1A6P48664 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A6P48664 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A6P48664 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC1A6P48664 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC1A6P48664 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A6P48664 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC1A6P48664 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.8■□□□□ 0.76
SLC1A6P48664 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 AL136967.2-201ENST00000623968 743 ntBASIC19.8■□□□□ 0.76
SLC1A6P48664 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC1A6P48664 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC1A6P48664 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A6P48664 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC1A6P48664 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC1A6P48664 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A6P48664 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A6P48664 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 SLC7A5P2-201ENST00000553010 536 ntBASIC19.79■□□□□ 0.76
SLC1A6P48664 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC1A6P48664 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A6P48664 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC1A6P48664 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A6P48664 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC1A6P48664 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC1A6P48664 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC1A6P48664 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 AC093484.2-201ENST00000580996 2166 ntBASIC19.78■□□□□ 0.76
SLC1A6P48664 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 TNXA-203ENST00000507684 2038 ntBASIC19.78■□□□□ 0.76
SLC1A6P48664 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC1A6P48664 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SLC1A6P48664 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC1A6P48664 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC1A6P48664 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC1A6P48664 AL358852.1-201ENST00000623174 1268 ntBASIC19.78■□□□□ 0.76
SLC1A6P48664 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC1A6P48664 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC1A6P48664 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC1A6P48664 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A6P48664 TREX1-205ENST00000625293 1783 ntBASIC19.78■□□□□ 0.76
SLC1A6P48664 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A6P48664 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC1A6P48664 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
SLC1A6P48664 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A6P48664 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC1A6P48664 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A6P48664 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SLC1A6P48664 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A6P48664 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A6P48664 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A6P48664 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms