Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.31■■□□□ 1.16
RFC5P40937 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.3■■□□□ 1.16
RFC5P40937 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.3■■□□□ 1.16
RFC5P40937 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.3■■□□□ 1.16
RFC5P40937 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.3■■□□□ 1.16
RFC5P40937 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.3■■□□□ 1.16
RFC5P40937 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.3■■□□□ 1.16
RFC5P40937 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFC5P40937 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RFC5P40937 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
RFC5P40937 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RFC5P40937 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFC5P40937 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.29■■□□□ 1.16
RFC5P40937 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.29■■□□□ 1.16
RFC5P40937 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.29■■□□□ 1.16
RFC5P40937 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.29■■□□□ 1.16
RFC5P40937 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.29■■□□□ 1.16
RFC5P40937 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.29■■□□□ 1.16
RFC5P40937 AC092720.2-201ENST00000602388 1665 ntBASIC22.29■■□□□ 1.16
RFC5P40937 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.29■■□□□ 1.16
RFC5P40937 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFC5P40937 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.29■■□□□ 1.16
RFC5P40937 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RFC5P40937 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFC5P40937 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RFC5P40937 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RFC5P40937 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.28■■□□□ 1.16
RFC5P40937 HLA-G-202ENST00000376815 851 ntBASIC22.28■■□□□ 1.16
RFC5P40937 HLA-G-203ENST00000376818 1127 ntBASIC22.28■■□□□ 1.16
RFC5P40937 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.28■■□□□ 1.16
RFC5P40937 AC069544.1-201ENST00000609399 999 ntBASIC22.28■■□□□ 1.16
RFC5P40937 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RFC5P40937 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RFC5P40937 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFC5P40937 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFC5P40937 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RFC5P40937 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.27■■□□□ 1.16
RFC5P40937 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RFC5P40937 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFC5P40937 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFC5P40937 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFC5P40937 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RFC5P40937 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.27■■□□□ 1.16
RFC5P40937 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.27■■□□□ 1.16
RFC5P40937 AL031963.3-201ENST00000606441 850 ntBASIC22.27■■□□□ 1.16
RFC5P40937 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RFC5P40937 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.27■■□□□ 1.16
RFC5P40937 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFC5P40937 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFC5P40937 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RFC5P40937 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.26■■□□□ 1.15
RFC5P40937 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.26■■□□□ 1.15
RFC5P40937 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RFC5P40937 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 AC098590.1-201ENST00000468126 897 ntBASIC22.26■■□□□ 1.15
RFC5P40937 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RFC5P40937 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.26■■□□□ 1.15
RFC5P40937 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.26■■□□□ 1.15
RFC5P40937 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.26■■□□□ 1.15
RFC5P40937 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC5P40937 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.26■■□□□ 1.15
RFC5P40937 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.26■■□□□ 1.15
RFC5P40937 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.26■■□□□ 1.15
RFC5P40937 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RFC5P40937 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC5P40937 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.25■■□□□ 1.15
RFC5P40937 KRT8P20-201ENST00000423953 1409 ntBASIC22.25■■□□□ 1.15
RFC5P40937 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RFC5P40937 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC5P40937 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC5P40937 GCSHP5-201ENST00000443090 522 ntBASIC22.25■■□□□ 1.15
RFC5P40937 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
RFC5P40937 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC5P40937 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 AC233263.1-201ENST00000578059 224 ntBASIC22.25■■□□□ 1.15
RFC5P40937 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC5P40937 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.25■■□□□ 1.15
RFC5P40937 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC5P40937 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.24■■□□□ 1.15
RFC5P40937 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.24■■□□□ 1.15
RFC5P40937 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms