Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 YCL023CYCL023C 348 nt1.72□□□□□ -2.13
SGN1P40561 UBP2YOR124C 3819 nt1.72□□□□□ -2.13
SGN1P40561 UFD4YKL010C 4452 nt1.72□□□□□ -2.13
SGN1P40561 FKS1YLR342W 5631 nt1.71□□□□□ -2.14
SGN1P40561 YER172C-AYER172C-A 381 nt1.71□□□□□ -2.14
SGN1P40561 YAL059C-AYAL059C-A 423 nt1.71□□□□□ -2.14
SGN1P40561 YOP1YPR028W 543 nt1.71□□□□□ -2.14
SGN1P40561 DGR2YKL121W 2559 nt1.7□□□□□ -2.14
SGN1P40561 SAS3YBL052C 2496 nt1.7□□□□□ -2.14
SGN1P40561 SFB2YNL049C 2631 nt1.7□□□□□ -2.14
SGN1P40561 FAB1YFR019W 6837 nt1.7□□□□□ -2.14
SGN1P40561 YOR343W-BYOR343W-B 5313 nt1.7□□□□□ -2.14
SGN1P40561 YHR214C-BYHR214C-B 5382 nt1.7□□□□□ -2.14
SGN1P40561 HIR3YJR140C 4947 nt1.69□□□□□ -2.14
SGN1P40561 YDR003W-AYDR003W-A 123 nt1.69□□□□□ -2.14
SGN1P40561 TRX1YLR043C 312 nt1.69□□□□□ -2.14
SGN1P40561 ATG11YPR049C 3537 nt1.68□□□□□ -2.14
SGN1P40561 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
SGN1P40561 BPH1YCR032W 6504 nt1.68□□□□□ -2.14
SGN1P40561 YOR072W-AYOR072W-A 249 nt1.68□□□□□ -2.14
SGN1P40561 YPL038W-AYPL038W-A 192 nt1.68□□□□□ -2.14
SGN1P40561 NUT2YPR168W 474 nt1.68□□□□□ -2.14
SGN1P40561 PKH3YDR466W 2697 nt1.67□□□□□ -2.14
SGN1P40561 CTF4YPR135W 2784 nt1.67□□□□□ -2.14
SGN1P40561 RIM20YOR275C 1986 nt1.67□□□□□ -2.14
SGN1P40561 CYC7YEL039C 342 nt1.67□□□□□ -2.14
SGN1P40561 RPL38YLR325C 237 nt1.67□□□□□ -2.14
SGN1P40561 MF(ALPHA)1YPL187W 498 nt1.67□□□□□ -2.14
SGN1P40561 YHR071C-AYHR071C-A 321 nt1.66□□□□□ -2.14
SGN1P40561 DGR1YNL130C-A 147 nt1.66□□□□□ -2.14
SGN1P40561 YLL032CYLL032C 2478 nt1.66□□□□□ -2.14
SGN1P40561 SKI3YPR189W 4299 nt1.66□□□□□ -2.14
SGN1P40561 PAC1YOR269W 1485 nt1.65□□□□□ -2.15
SGN1P40561 YHL041WYHL041W 450 nt1.65□□□□□ -2.15
SGN1P40561 YBL012CYBL012C 402 nt1.65□□□□□ -2.15
SGN1P40561 RPB10YOR210W 213 nt1.65□□□□□ -2.15
SGN1P40561 SGO1YOR073W 1773 nt1.64□□□□□ -2.15
SGN1P40561 MRPL31YKL138C 396 nt1.64□□□□□ -2.15
SGN1P40561 UPS1YLR193C 528 nt1.64□□□□□ -2.15
SGN1P40561 YOR108C-AYOR108C-A 210 nt1.64□□□□□ -2.15
SGN1P40561 YNL144CYNL144C 2223 nt1.64□□□□□ -2.15
SGN1P40561 SPP41YDR464W 4308 nt1.63□□□□□ -2.15
SGN1P40561 TBS1YBR150C 3285 nt1.63□□□□□ -2.15
SGN1P40561 EMC5YIL027C 426 nt1.63□□□□□ -2.15
SGN1P40561 YML007C-AYML007C-A 111 nt1.63□□□□□ -2.15
SGN1P40561 snR51snR51 107 nt1.63□□□□□ -2.15
SGN1P40561 YOR093CYOR093C 4947 nt1.62□□□□□ -2.15
SGN1P40561 PIG1YLR273C 1947 nt1.62□□□□□ -2.15
SGN1P40561 YDL240C-AYDL240C-A 138 nt1.62□□□□□ -2.15
SGN1P40561 RPS20YHL015W 366 nt1.62□□□□□ -2.15 RIP-Chip
SGN1P40561 YHL037CYHL037C 402 nt1.62□□□□□ -2.15
SGN1P40561 PCC1YKR095W-A 267 nt1.62□□□□□ -2.15
SGN1P40561 INP2YMR163C 2118 nt1.62□□□□□ -2.15
SGN1P40561 SAR1YPL218W 573 nt1.62□□□□□ -2.15
SGN1P40561 RKM1YPL208W 1752 nt1.62□□□□□ -2.15
SGN1P40561 YOR019WYOR019W 2193 nt1.61□□□□□ -2.15
SGN1P40561 YDR524W-CYDR524W-C 90 nt1.61□□□□□ -2.15
SGN1P40561 YPR016W-AYPR016W-A 261 nt1.61□□□□□ -2.15
SGN1P40561 MYO2YOR326W 4725 nt1.6□□□□□ -2.15
SGN1P40561 SDH2YLL041C 801 nt1.6□□□□□ -2.15
SGN1P40561 YLR255CYLR255C 354 nt1.6□□□□□ -2.15
SGN1P40561 APL2YKL135C 2181 nt1.59□□□□□ -2.15
SGN1P40561 NEO1YIL048W 3456 nt1.59□□□□□ -2.15
SGN1P40561 SEC5YDR166C 2916 nt1.59□□□□□ -2.15
SGN1P40561 PAU2YEL049W 363 nt1.59□□□□□ -2.15
SGN1P40561 SPO24YPR036W-A 204 nt1.59□□□□□ -2.15
SGN1P40561 NOC3YLR002C 1992 nt1.59□□□□□ -2.16
SGN1P40561 RPL31AYDL075W 342 nt1.58□□□□□ -2.16
SGN1P40561 SRP14YDL092W 441 nt1.58□□□□□ -2.16
SGN1P40561 Q0142Q0142 177 nt1.58□□□□□ -2.16
SGN1P40561 YMR247W-AYMR247W-A 144 nt1.58□□□□□ -2.16
SGN1P40561 ZIP2YGL249W 2115 nt1.58□□□□□ -2.16
SGN1P40561 YCS4YLR272C 3531 nt1.58□□□□□ -2.16
SGN1P40561 YBP1YBR216C 2025 nt1.57□□□□□ -2.16
SGN1P40561 NCA2YPR155C 1851 nt1.57□□□□□ -2.16
SGN1P40561 CLU1YMR012W 3834 nt1.57□□□□□ -2.16
SGN1P40561 YMR242W-AYMR242W-A 90 nt1.57□□□□□ -2.16
SGN1P40561 YMR290W-AYMR290W-A 348 nt1.57□□□□□ -2.16
SGN1P40561 YPR002C-AYPR002C-A 198 nt1.57□□□□□ -2.16
SGN1P40561 ENV11YGR071C 2583 nt1.57□□□□□ -2.16
SGN1P40561 KCS1YDR017C 3153 nt1.57□□□□□ -2.16
SGN1P40561 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
SGN1P40561 YLL054CYLL054C 2532 nt1.56□□□□□ -2.16
SGN1P40561 YMR230W-AYMR230W-A 189 nt1.56□□□□□ -2.16
SGN1P40561 UFD2YDL190C 2886 nt1.56□□□□□ -2.16
SGN1P40561 BST1YFL025C 3090 nt1.55□□□□□ -2.16
SGN1P40561 YDR426CYDR426C 378 nt1.55□□□□□ -2.16
SGN1P40561 tT(UGU)HtT(UGU)H 72 nt1.55□□□□□ -2.16
SGN1P40561 tW(UCA)QtW(UCA)Q 74 nt1.55□□□□□ -2.16
SGN1P40561 YMR141W-AYMR141W-A 225 nt1.55□□□□□ -2.16
SGN1P40561 YOL160WYOL160W 342 nt1.55□□□□□ -2.16
SGN1P40561 KIP1YBL063W 3336 nt1.54□□□□□ -2.16
SGN1P40561 YOR199WYOR199W 330 nt1.54□□□□□ -2.16
SGN1P40561 YOR376WYOR376W 369 nt1.54□□□□□ -2.16
SGN1P40561 AI5_ALPHAQ0070 1893 nt1.53□□□□□ -2.16
SGN1P40561 YLR035C-AYLR035C-A 3468 nt1.53□□□□□ -2.16
SGN1P40561 HTB2YBL002W 396 nt1.53□□□□□ -2.16
SGN1P40561 YMR272W-BYMR272W-B 108 nt1.53□□□□□ -2.16
SGN1P40561 VPS54YDR027C 2670 nt1.53□□□□□ -2.17
SGN1P40561 RAD50YNL250W 3939 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 6.7 ms