Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RPL13AP40429 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.92□□□□□ -0.18
RPL13AP40429 AC005082.1-201ENST00000413042 2259 ntBASIC13.92□□□□□ -0.18
RPL13AP40429 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC13.91□□□□□ -0.18
RPL13AP40429 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RPL13AP40429 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.91□□□□□ -0.18
RPL13AP40429 MIR4787-201ENST00000607364 84 ntBASIC13.91□□□□□ -0.18
RPL13AP40429 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RPL13AP40429 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
RPL13AP40429 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 AC006128.1-201ENST00000624704 1661 ntBASIC13.91□□□□□ -0.18
RPL13AP40429 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
RPL13AP40429 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.91□□□□□ -0.18
RPL13AP40429 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL13AP40429 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RPL13AP40429 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
RPL13AP40429 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.9□□□□□ -0.18
RPL13AP40429 AC026471.6-201ENST00000622954 1905 ntBASIC13.9□□□□□ -0.18
RPL13AP40429 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RPL13AP40429 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC13.9□□□□□ -0.18
RPL13AP40429 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RPL13AP40429 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.9□□□□□ -0.18
RPL13AP40429 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RPL13AP40429 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL13AP40429 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC13.89□□□□□ -0.19
RPL13AP40429 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC13.89□□□□□ -0.19
RPL13AP40429 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
RPL13AP40429 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13.89□□□□□ -0.19
RPL13AP40429 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.89□□□□□ -0.19
RPL13AP40429 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.89□□□□□ -0.19
RPL13AP40429 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.89□□□□□ -0.19
RPL13AP40429 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.89□□□□□ -0.19
RPL13AP40429 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms