Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 YPR097WYPR097W 3222 nt2.53□□□□□ -2.01
RSP5P39940 SIR3YLR442C 2937 nt2.52□□□□□ -2.01
RSP5P39940 PHO91YNR013C 2685 nt2.52□□□□□ -2.01
RSP5P39940 NPR2YEL062W 1848 nt2.52□□□□□ -2.01
RSP5P39940 COG8YML071C 1824 nt2.52□□□□□ -2.01
RSP5P39940 LYS14YDR034C 2373 nt2.51□□□□□ -2.01
RSP5P39940 YDR341CYDR341C 1824 nt2.51□□□□□ -2.01
RSP5P39940 PDR1YGL013C 3207 nt2.51□□□□□ -2.01
RSP5P39940 RAV1YJR033C 4074 nt2.51□□□□□ -2.01
RSP5P39940 YGR250CYGR250C 2346 nt2.51□□□□□ -2.01
RSP5P39940 RTT101YJL047C 2529 nt2.5□□□□□ -2.01
RSP5P39940 RAD61YDR014W 1944 nt2.5□□□□□ -2.01
RSP5P39940 MRP10YDL045W-A 288 nt2.5□□□□□ -2.01
RSP5P39940 YHR073W-AYHR073W-A 177 nt2.5□□□□□ -2.01
RSP5P39940 PAU18YLL064C 363 nt2.5□□□□□ -2.01
RSP5P39940 YMR141W-AYMR141W-A 225 nt2.5□□□□□ -2.01
RSP5P39940 PAU6YNR076W 363 nt2.5□□□□□ -2.01
RSP5P39940 YBR064WYBR064W 429 nt2.5□□□□□ -2.01
RSP5P39940 SSD1YDR293C 3753 nt2.5□□□□□ -2.01
RSP5P39940 VPS13YLL040C 9435 nt2.5□□□□□ -2.01
RSP5P39940 YDL185C-AYDL185C-A 228 nt2.49□□□□□ -2.01
RSP5P39940 COA4YLR218C 453 nt2.49□□□□□ -2.01
RSP5P39940 RPB10YOR210W 213 nt2.49□□□□□ -2.01
RSP5P39940 GIP3YPL137C 3831 nt2.49□□□□□ -2.01
RSP5P39940 PHO2YDL106C 1680 nt2.49□□□□□ -2.01
RSP5P39940 NAM7YMR080C 2916 nt2.49□□□□□ -2.01
RSP5P39940 PET309YLR067C 2898 nt2.49□□□□□ -2.01
RSP5P39940 ZRG17YNR039C 1818 nt2.49□□□□□ -2.01
RSP5P39940 SYH1YPL105C 2550 nt2.48□□□□□ -2.01
RSP5P39940 DCP2YNL118C 2913 nt2.48□□□□□ -2.01
RSP5P39940 YJL150WYJL150W 303 nt2.48□□□□□ -2.01
RSP5P39940 YOR302WYOR302W 78 nt2.48□□□□□ -2.01
RSP5P39940 YKU70YMR284W 1809 nt2.47□□□□□ -2.01
RSP5P39940 PLC1YPL268W 2610 nt2.47□□□□□ -2.01
RSP5P39940 YER088C-AYER088C-A 324 nt2.47□□□□□ -2.01
RSP5P39940 YKR075W-AYKR075W-A 270 nt2.47□□□□□ -2.01
RSP5P39940 APC9YLR102C 798 nt2.47□□□□□ -2.01
RSP5P39940 IST2YBR086C 2841 nt2.47□□□□□ -2.01
RSP5P39940 SCW11YGL028C 1629 nt2.46□□□□□ -2.02
RSP5P39940 tC(GCA)BtC(GCA)B 72 nt2.46□□□□□ -2.02
RSP5P39940 tC(GCA)GtC(GCA)G 72 nt2.46□□□□□ -2.02
RSP5P39940 tC(GCA)P1tC(GCA)P1 72 nt2.46□□□□□ -2.02
RSP5P39940 tC(GCA)P2tC(GCA)P2 72 nt2.46□□□□□ -2.02
RSP5P39940 YHR071C-AYHR071C-A 321 nt2.46□□□□□ -2.02
RSP5P39940 MVP1YMR004W 1536 nt2.46□□□□□ -2.02
RSP5P39940 SLN1YIL147C 3663 nt2.46□□□□□ -2.02
RSP5P39940 ARP8YOR141C 2646 nt2.45□□□□□ -2.02
RSP5P39940 UBP1YDL122W 2430 nt2.45□□□□□ -2.02
RSP5P39940 snR60snR60 104 nt2.45□□□□□ -2.02
RSP5P39940 RPL37BYDR500C 267 nt2.45□□□□□ -2.02
RSP5P39940 YLR342W-AYLR342W-A 174 nt2.45□□□□□ -2.02
RSP5P39940 COX14YML129C 213 nt2.45□□□□□ -2.02
RSP5P39940 YBR178WYBR178W 375 nt2.45□□□□□ -2.02
RSP5P39940 YCL046WYCL046W 324 nt2.45□□□□□ -2.02
RSP5P39940 ZIP1YDR285W 2628 nt2.44□□□□□ -2.02
RSP5P39940 MAK10YEL053C 2202 nt2.44□□□□□ -2.02
RSP5P39940 SIR4YDR227W 4077 nt2.44□□□□□ -2.02
RSP5P39940 YJL135WYJL135W 318 nt2.44□□□□□ -2.02
RSP5P39940 YOL019W-AYOL019W-A 153 nt2.44□□□□□ -2.02
RSP5P39940 YBL005W-BYBL005W-B 5268 nt2.44□□□□□ -2.02
RSP5P39940 LCD1YDR499W 2244 nt2.44□□□□□ -2.02
RSP5P39940 PRP39YML046W 1890 nt2.43□□□□□ -2.02
RSP5P39940 YMR194C-AYMR194C-A 225 nt2.43□□□□□ -2.02
RSP5P39940 snR48snR48 113 nt2.43□□□□□ -2.02
RSP5P39940 YMR230W-AYMR230W-A 189 nt2.42□□□□□ -2.02
RSP5P39940 INO80YGL150C 4470 nt2.42□□□□□ -2.02
RSP5P39940 snR55snR55 98 nt2.41□□□□□ -2.02
RSP5P39940 YCR087C-AYCR087C-A 462 nt2.41□□□□□ -2.02
RSP5P39940 GPG1YGL121C 381 nt2.41□□□□□ -2.02
RSP5P39940 YOR055WYOR055W 435 nt2.41□□□□□ -2.02
RSP5P39940 NOP14YDL148C 2433 nt2.41□□□□□ -2.02
RSP5P39940 CSF1YLR087C 8877 nt2.4□□□□□ -2.02
RSP5P39940 TDA9YML081W 3756 nt2.4□□□□□ -2.03
RSP5P39940 YDR003W-AYDR003W-A 123 nt2.4□□□□□ -2.03
RSP5P39940 YMR172C-AYMR172C-A 384 nt2.4□□□□□ -2.03
RSP5P39940 NAB6YML117W 3405 nt2.4□□□□□ -2.03
RSP5P39940 CTR9YOL145C 3234 nt2.4□□□□□ -2.03
RSP5P39940 snR72snR72 98 nt2.39□□□□□ -2.03
RSP5P39940 YGL052WYGL052W 306 nt2.39□□□□□ -2.03
RSP5P39940 YNL028WYNL028W 318 nt2.39□□□□□ -2.03
RSP5P39940 SAS3YBL052C 2496 nt2.39□□□□□ -2.03
RSP5P39940 MLH1YMR167W 2310 nt2.37□□□□□ -2.03
RSP5P39940 CAT2YML042W 2013 nt2.37□□□□□ -2.03
RSP5P39940 SPT21YMR179W 2277 nt2.37□□□□□ -2.03
RSP5P39940 YGR164WYGR164W 336 nt2.37□□□□□ -2.03
RSP5P39940 HMI1YOL095C 2121 nt2.37□□□□□ -2.03
RSP5P39940 SCP160YJL080C 3669 nt2.37□□□□□ -2.03
RSP5P39940 DNA2YHR164C 4569 nt2.37□□□□□ -2.03
RSP5P39940 HER1YOR227W 3741 nt2.37□□□□□ -2.03
RSP5P39940 SVL3YPL032C 2478 nt2.36□□□□□ -2.03
RSP5P39940 VIK1YPL253C 1944 nt2.36□□□□□ -2.03
RSP5P39940 IRE1YHR079C 3348 nt2.36□□□□□ -2.03
RSP5P39940 tF(GAA)QtF(GAA)Q 75 nt2.36□□□□□ -2.03
RSP5P39940 PAU2YEL049W 363 nt2.36□□□□□ -2.03
RSP5P39940 YLR140WYLR140W 327 nt2.36□□□□□ -2.03
RSP5P39940 CSE2YNR010W 450 nt2.36□□□□□ -2.03
RSP5P39940 YOR108C-AYOR108C-A 210 nt2.36□□□□□ -2.03
RSP5P39940 SAP185YJL098W 3177 nt2.35□□□□□ -2.03
RSP5P39940 NIP100YPL174C 2607 nt2.35□□□□□ -2.03
RSP5P39940 SSS1YDR086C 243 nt2.35□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 55.1 ms