Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RPL3P39023 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.14■□□□□ 0.65
RPL3P39023 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.14■□□□□ 0.65
RPL3P39023 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
RPL3P39023 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.14■□□□□ 0.65
RPL3P39023 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.14■□□□□ 0.65
RPL3P39023 AC087623.3-201ENST00000607047 1098 ntBASIC19.14■□□□□ 0.65
RPL3P39023 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.14■□□□□ 0.65
RPL3P39023 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RPL3P39023 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.14■□□□□ 0.65
RPL3P39023 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.13■□□□□ 0.65
RPL3P39023 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.13■□□□□ 0.65
RPL3P39023 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.13■□□□□ 0.65
RPL3P39023 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RPL3P39023 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
RPL3P39023 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RPL3P39023 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.13■□□□□ 0.65
RPL3P39023 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPL3P39023 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RPL3P39023 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RPL3P39023 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.12■□□□□ 0.65
RPL3P39023 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
RPL3P39023 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.12■□□□□ 0.65
RPL3P39023 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPL3P39023 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.12■□□□□ 0.65
RPL3P39023 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.12■□□□□ 0.65
RPL3P39023 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RPL3P39023 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.12■□□□□ 0.65
RPL3P39023 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.12■□□□□ 0.65
RPL3P39023 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.12■□□□□ 0.65
RPL3P39023 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPL3P39023 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RPL3P39023 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPL3P39023 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.11■□□□□ 0.65
RPL3P39023 AC112907.3-201ENST00000577781 2400 ntBASIC19.11■□□□□ 0.65
RPL3P39023 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.11■□□□□ 0.65
RPL3P39023 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.11■□□□□ 0.65
RPL3P39023 KRT18P5-201ENST00000436075 1291 ntBASIC19.11■□□□□ 0.65
RPL3P39023 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.11■□□□□ 0.65
RPL3P39023 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPL3P39023 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RPL3P39023 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPL3P39023 BX119927.1-201ENST00000636596 1552 ntBASIC19.1■□□□□ 0.65
RPL3P39023 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
RPL3P39023 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RPL3P39023 MCRIP2P1-201ENST00000394346 511 ntBASIC19.1■□□□□ 0.65
RPL3P39023 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 MFSD11-216ENST00000590393 1141 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms