Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGCLP35914 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HMGCLP35914 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HMGCLP35914 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCLP35914 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCLP35914 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCLP35914 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
HMGCLP35914 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCLP35914 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 AC023632.3-201ENST00000521633 145 ntBASIC20.11■□□□□ 0.81
HMGCLP35914 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.11■□□□□ 0.81
HMGCLP35914 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCLP35914 AC083880.1-201ENST00000608266 535 ntBASIC20.11■□□□□ 0.81
HMGCLP35914 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HMGCLP35914 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCLP35914 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HMGCLP35914 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCLP35914 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCLP35914 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLP35914 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGCLP35914 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HMGCLP35914 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLP35914 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLP35914 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.1■□□□□ 0.81
HMGCLP35914 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLP35914 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLP35914 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.1■□□□□ 0.81
HMGCLP35914 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLP35914 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLP35914 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HMGCLP35914 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCLP35914 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HMGCLP35914 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HMGCLP35914 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCLP35914 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.09■□□□□ 0.81
HMGCLP35914 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
HMGCLP35914 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLP35914 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
HMGCLP35914 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLP35914 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGCLP35914 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGCLP35914 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLP35914 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLP35914 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGCLP35914 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLP35914 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLP35914 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
HMGCLP35914 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.08■□□□□ 0.81
HMGCLP35914 HLA-B-256ENST00000639848 1089 ntBASIC20.08■□□□□ 0.81
HMGCLP35914 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCLP35914 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
HMGCLP35914 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCLP35914 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCLP35914 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCLP35914 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HMGCLP35914 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.08■□□□□ 0.8
HMGCLP35914 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 AL031963.3-201ENST00000606441 850 ntBASIC20.07■□□□□ 0.8
HMGCLP35914 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
HMGCLP35914 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 KRT8P20-201ENST00000423953 1409 ntBASIC20.07■□□□□ 0.8
HMGCLP35914 KRT8P17-201ENST00000453110 1448 ntBASIC20.07■□□□□ 0.8
HMGCLP35914 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLP35914 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCLP35914 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCLP35914 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCLP35914 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
HMGCLP35914 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms