Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.16■□□□□ 0.5
APEX1P27695 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.16■□□□□ 0.5
APEX1P27695 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APEX1P27695 AL162377.1-201ENST00000618844 1793 ntBASIC18.16■□□□□ 0.5
APEX1P27695 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APEX1P27695 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APEX1P27695 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APEX1P27695 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
APEX1P27695 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
APEX1P27695 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.16■□□□□ 0.5
APEX1P27695 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 AC116562.4-201ENST00000641316 2276 ntBASIC18.15■□□□□ 0.5
APEX1P27695 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
APEX1P27695 AL512408.1-201ENST00000569378 2000 ntBASIC18.15■□□□□ 0.5
APEX1P27695 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.15■□□□□ 0.5
APEX1P27695 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.15■□□□□ 0.5
APEX1P27695 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.15■□□□□ 0.5
APEX1P27695 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.15■□□□□ 0.5
APEX1P27695 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
APEX1P27695 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.15■□□□□ 0.5
APEX1P27695 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.15■□□□□ 0.5
APEX1P27695 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APEX1P27695 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.15■□□□□ 0.5
APEX1P27695 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APEX1P27695 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APEX1P27695 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.14■□□□□ 0.49
APEX1P27695 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.14■□□□□ 0.49
APEX1P27695 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.14■□□□□ 0.49
APEX1P27695 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
APEX1P27695 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.14■□□□□ 0.49
APEX1P27695 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.14■□□□□ 0.49
APEX1P27695 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APEX1P27695 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.14■□□□□ 0.49
APEX1P27695 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
APEX1P27695 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APEX1P27695 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APEX1P27695 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
APEX1P27695 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
APEX1P27695 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
APEX1P27695 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.13■□□□□ 0.49
APEX1P27695 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.13■□□□□ 0.49
APEX1P27695 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 ID1-201ENST00000376105 1233 ntBASIC18.13■□□□□ 0.49
APEX1P27695 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
APEX1P27695 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.13■□□□□ 0.49
APEX1P27695 MYCNOS-205ENST00000641950 531 ntBASIC18.13■□□□□ 0.49
APEX1P27695 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 AC099778.1-201ENST00000568593 1911 ntBASIC18.13■□□□□ 0.49
APEX1P27695 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.13■□□□□ 0.49
APEX1P27695 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APEX1P27695 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.13■□□□□ 0.49
APEX1P27695 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
APEX1P27695 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.12■□□□□ 0.49
APEX1P27695 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
APEX1P27695 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
APEX1P27695 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.12■□□□□ 0.49
APEX1P27695 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.12■□□□□ 0.49
APEX1P27695 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.12■□□□□ 0.49
APEX1P27695 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.12■□□□□ 0.49
APEX1P27695 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APEX1P27695 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms