Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.43■□□□□ 0.38
CD40P25942 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CD40P25942 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.42■□□□□ 0.38
CD40P25942 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.42■□□□□ 0.38
CD40P25942 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CD40P25942 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.42■□□□□ 0.38
CD40P25942 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.42■□□□□ 0.38
CD40P25942 AC093827.2-201ENST00000512654 315 ntBASIC17.42■□□□□ 0.38
CD40P25942 C1QBPP2-201ENST00000528754 825 ntBASIC17.42■□□□□ 0.38
CD40P25942 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.42■□□□□ 0.38
CD40P25942 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 AL359736.2-201ENST00000621992 437 ntBASIC17.42■□□□□ 0.38
CD40P25942 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CD40P25942 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.42■□□□□ 0.38
CD40P25942 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.42■□□□□ 0.38
CD40P25942 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD40P25942 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD40P25942 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.41■□□□□ 0.38
CD40P25942 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD40P25942 AC005229.4-201ENST00000610085 2198 ntBASIC17.41■□□□□ 0.38
CD40P25942 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD40P25942 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CD40P25942 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.41■□□□□ 0.38
CD40P25942 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD40P25942 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CD40P25942 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.41■□□□□ 0.38
CD40P25942 RPPH1-201ENST00000516869 333 ntBASIC17.41■□□□□ 0.38
CD40P25942 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.41■□□□□ 0.38
CD40P25942 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.41■□□□□ 0.38
CD40P25942 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD40P25942 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD40P25942 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.41■□□□□ 0.38
CD40P25942 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.41■□□□□ 0.38
CD40P25942 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.41■□□□□ 0.38
CD40P25942 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.41■□□□□ 0.38
CD40P25942 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CD40P25942 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CD40P25942 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CD40P25942 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CD40P25942 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.4■□□□□ 0.38
CD40P25942 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.4■□□□□ 0.38
CD40P25942 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.4■□□□□ 0.38
CD40P25942 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.4■□□□□ 0.38
CD40P25942 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CD40P25942 FAM197Y4-202ENST00000622692 608 ntBASIC17.4■□□□□ 0.38
CD40P25942 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.4■□□□□ 0.38
CD40P25942 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CD40P25942 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CD40P25942 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.4■□□□□ 0.38
CD40P25942 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CD40P25942 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD40P25942 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.4■□□□□ 0.38
CD40P25942 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CD40P25942 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.39■□□□□ 0.38
CD40P25942 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.39■□□□□ 0.38
CD40P25942 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD40P25942 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD40P25942 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CD40P25942 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CD40P25942 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
CD40P25942 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD40P25942 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 UBE2SP1-201ENST00000450587 669 ntBASIC17.39■□□□□ 0.37
CD40P25942 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.39■□□□□ 0.37
CD40P25942 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CD40P25942 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.39■□□□□ 0.37
CD40P25942 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD40P25942 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.39■□□□□ 0.37
CD40P25942 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.39■□□□□ 0.37
CD40P25942 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms