Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 SSD1YDR293C 3753 nt2.41□□□□□ -2.02
MSH2P25847 LYS14YDR034C 2373 nt2.41□□□□□ -2.02
MSH2P25847 YDR366CYDR366C 399 nt2.41□□□□□ -2.02
MSH2P25847 YHR063W-AYHR063W-A 336 nt2.41□□□□□ -2.02
MSH2P25847 MCM22YJR135C 720 nt2.41□□□□□ -2.02
MSH2P25847 YAL059C-AYAL059C-A 423 nt2.41□□□□□ -2.02
MSH2P25847 YCL046WYCL046W 324 nt2.41□□□□□ -2.02
MSH2P25847 YOL098CYOL098C 3114 nt2.41□□□□□ -2.02
MSH2P25847 HCS1YKL017C 2052 nt2.4□□□□□ -2.02
MSH2P25847 snR8snR8 190 nt2.4□□□□□ -2.03
MSH2P25847 PEX4YGR133W 552 nt2.4□□□□□ -2.03
MSH2P25847 ATP7YKL016C 525 nt2.4□□□□□ -2.03
MSH2P25847 TRX1YLR043C 312 nt2.4□□□□□ -2.03
MSH2P25847 SAC3YDR159W 3906 nt2.4□□□□□ -2.03
MSH2P25847 ZRG17YNR039C 1818 nt2.4□□□□□ -2.03
MSH2P25847 INP2YMR163C 2118 nt2.39□□□□□ -2.03
MSH2P25847 SAP185YJL098W 3177 nt2.39□□□□□ -2.03
MSH2P25847 HMRA2YCR096C 360 nt2.39□□□□□ -2.03
MSH2P25847 YDR344CYDR344C 444 nt2.39□□□□□ -2.03
MSH2P25847 YHR180W-AYHR180W-A 183 nt2.39□□□□□ -2.03
MSH2P25847 YIL032CYIL032C 357 nt2.39□□□□□ -2.03
MSH2P25847 RPB10YOR210W 213 nt2.39□□□□□ -2.03
MSH2P25847 ARP7YPR034W 1434 nt2.39□□□□□ -2.03
MSH2P25847 DCP2YNL118C 2913 nt2.39□□□□□ -2.03
MSH2P25847 CHC1YGL206C 4962 nt2.38□□□□□ -2.03
MSH2P25847 YCR087C-AYCR087C-A 462 nt2.38□□□□□ -2.03
MSH2P25847 YGR265WYGR265W 411 nt2.38□□□□□ -2.03
MSH2P25847 YKL165C-AYKL165C-A 234 nt2.38□□□□□ -2.03
MSH2P25847 TOF1YNL273W 3717 nt2.37□□□□□ -2.03
MSH2P25847 YHL042WYHL042W 453 nt2.37□□□□□ -2.03
MSH2P25847 MAK10YEL053C 2202 nt2.36□□□□□ -2.03
MSH2P25847 YER088C-AYER088C-A 324 nt2.36□□□□□ -2.03
MSH2P25847 YPR063CYPR063C 423 nt2.36□□□□□ -2.03
MSH2P25847 MVP1YMR004W 1536 nt2.36□□□□□ -2.03
MSH2P25847 ZIP1YDR285W 2628 nt2.36□□□□□ -2.03
MSH2P25847 YHR071C-AYHR071C-A 321 nt2.35□□□□□ -2.03
MSH2P25847 YJL015CYJL015C 285 nt2.35□□□□□ -2.03
MSH2P25847 YPL152W-AYPL152W-A 99 nt2.35□□□□□ -2.03
MSH2P25847 PUT3YKL015W 2940 nt2.35□□□□□ -2.03
MSH2P25847 SEC16YPL085W 6588 nt2.34□□□□□ -2.03
MSH2P25847 BUD2YKL092C 3315 nt2.34□□□□□ -2.03
MSH2P25847 CAT2YML042W 2013 nt2.34□□□□□ -2.03
MSH2P25847 YGR250CYGR250C 2346 nt2.34□□□□□ -2.03
MSH2P25847 TDA9YML081W 3756 nt2.34□□□□□ -2.03
MSH2P25847 YDR003W-AYDR003W-A 123 nt2.34□□□□□ -2.03
MSH2P25847 YGR069WYGR069W 336 nt2.34□□□□□ -2.03
MSH2P25847 YMR158W-BYMR158W-B 321 nt2.34□□□□□ -2.03
MSH2P25847 NOP14YDL148C 2433 nt2.34□□□□□ -2.03
MSH2P25847 HER1YOR227W 3741 nt2.34□□□□□ -2.04
MSH2P25847 RGA1YOR127W 3024 nt2.33□□□□□ -2.04
MSH2P25847 CTR9YOL145C 3234 nt2.33□□□□□ -2.04
MSH2P25847 YLL032CYLL032C 2478 nt2.33□□□□□ -2.04
MSH2P25847 YFR016CYFR016C 3702 nt2.32□□□□□ -2.04
MSH2P25847 YDL211CYDL211C 1119 nt2.32□□□□□ -2.04
MSH2P25847 ALG13YGL047W 609 nt2.32□□□□□ -2.04
MSH2P25847 YJL135WYJL135W 318 nt2.32□□□□□ -2.04
MSH2P25847 BNI1YNL271C 5862 nt2.32□□□□□ -2.04
MSH2P25847 YOR343W-BYOR343W-B 5313 nt2.31□□□□□ -2.04
MSH2P25847 IRE1YHR079C 3348 nt2.31□□□□□ -2.04
MSH2P25847 OST1YJL002C 1431 nt2.31□□□□□ -2.04
MSH2P25847 USO1YDL058W 5373 nt2.31□□□□□ -2.04
MSH2P25847 COG8YML071C 1824 nt2.31□□□□□ -2.04
MSH2P25847 UFD4YKL010C 4452 nt2.3□□□□□ -2.04
MSH2P25847 SAP190YKR028W 3102 nt2.3□□□□□ -2.04
MSH2P25847 snR72snR72 98 nt2.3□□□□□ -2.04
MSH2P25847 YOR008C-AYOR008C-A 225 nt2.3□□□□□ -2.04
MSH2P25847 DNF1YER166W 4716 nt2.3□□□□□ -2.04
MSH2P25847 RAD61YDR014W 1944 nt2.3□□□□□ -2.04
MSH2P25847 MSC6YOR354C 2079 nt2.3□□□□□ -2.04
MSH2P25847 HMI1YOL095C 2121 nt2.29□□□□□ -2.04
MSH2P25847 snR60snR60 104 nt2.29□□□□□ -2.04
MSH2P25847 ATG9YDL149W 2994 nt2.29□□□□□ -2.04
MSH2P25847 MSH5YDL154W 2706 nt2.28□□□□□ -2.04
MSH2P25847 YDL118WYDL118W 381 nt2.28□□□□□ -2.04
MSH2P25847 SDH2YLL041C 801 nt2.28□□□□□ -2.04
MSH2P25847 SAS3YBL052C 2496 nt2.28□□□□□ -2.04
MSH2P25847 STH1YIL126W 4080 nt2.27□□□□□ -2.05
MSH2P25847 KOG1YHR186C 4674 nt2.27□□□□□ -2.05
MSH2P25847 IRC8YJL051W 2469 nt2.27□□□□□ -2.05
MSH2P25847 MCD1YDL003W 1701 nt2.26□□□□□ -2.05
MSH2P25847 RLM1YPL089C 2031 nt2.26□□□□□ -2.05
MSH2P25847 SCW11YGL028C 1629 nt2.26□□□□□ -2.05
MSH2P25847 LCD1YDR499W 2244 nt2.26□□□□□ -2.05
MSH2P25847 MLH3YPL164C 2148 nt2.26□□□□□ -2.05
MSH2P25847 SEY1YOR165W 2331 nt2.25□□□□□ -2.05
MSH2P25847 AGC1YPR021C 2709 nt2.25□□□□□ -2.05
MSH2P25847 TFC3YAL001C 3483 nt2.25□□□□□ -2.05
MSH2P25847 SEC63YOR254C 1992 nt2.25□□□□□ -2.05
MSH2P25847 HSH155YMR288W 2916 nt2.24□□□□□ -2.05
MSH2P25847 FRK1YPL141C 2598 nt2.24□□□□□ -2.05
MSH2P25847 SRP14YDL092W 441 nt2.24□□□□□ -2.05
MSH2P25847 ANS1YHR126C 480 nt2.24□□□□□ -2.05
MSH2P25847 YOL160WYOL160W 342 nt2.24□□□□□ -2.05
MSH2P25847 MDM20YOL076W 2391 nt2.24□□□□□ -2.05
MSH2P25847 SEC31YDL195W 3822 nt2.24□□□□□ -2.05
MSH2P25847 PDR8YLR266C 2106 nt2.23□□□□□ -2.05
MSH2P25847 YGL188C-AYGL188C-A 141 nt2.23□□□□□ -2.05
MSH2P25847 YOR108C-AYOR108C-A 210 nt2.23□□□□□ -2.05
MSH2P25847 SPT21YMR179W 2277 nt2.22□□□□□ -2.05
MSH2P25847 YMR242W-AYMR242W-A 90 nt2.22□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 76.5 ms