Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB3BP20337 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB3BP20337 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB3BP20337 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB3BP20337 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB3BP20337 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB3BP20337 AC233992.3-201ENST00000607491 485 ntBASIC17.63■□□□□ 0.41
RAB3BP20337 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB3BP20337 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3BP20337 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB3BP20337 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RAB3BP20337 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3BP20337 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RAB3BP20337 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB3BP20337 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB3BP20337 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB3BP20337 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 AC008175.2-201ENST00000612840 297 ntBASIC17.62■□□□□ 0.41
RAB3BP20337 RARRES2P11-201ENST00000635158 484 ntBASIC17.62■□□□□ 0.41
RAB3BP20337 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RAB3BP20337 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RAB3BP20337 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB3BP20337 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3BP20337 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3BP20337 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RAB3BP20337 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB3BP20337 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB3BP20337 POU5F1P4-201ENST00000413175 1085 ntBASIC17.61■□□□□ 0.41
RAB3BP20337 GUSBP5-201ENST00000418136 578 ntBASIC17.61■□□□□ 0.41
RAB3BP20337 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.61■□□□□ 0.41
RAB3BP20337 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB3BP20337 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RAB3BP20337 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB3BP20337 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB3BP20337 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB3BP20337 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB3BP20337 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms